Variant report
| Variant | rs169325 |
|---|---|
| Chromosome Location | chr11:32599783-32599784 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:3)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
(count:3 , 50 per page) page:
1
| No data |
| No data |
| No data |
| Variant related genes | Relation type |
|---|---|
| ENSG00000149100 | Chromatin interaction |
rSNPs within LD-proxies of this variant (count:25)
| rs_ID | r2[population] |
|---|---|
| rs10767966 | 0.82[ASN][1000 genomes] |
| rs11031908 | 0.95[ASN][1000 genomes] |
| rs12284205 | 1.00[ASN][1000 genomes] |
| rs1324399 | 0.95[ASN][1000 genomes] |
| rs1386179 | 0.90[ASN][1000 genomes] |
| rs1386180 | 0.90[ASN][1000 genomes] |
| rs1386181 | 0.90[ASN][1000 genomes] |
| rs198266 | 0.82[ASN][1000 genomes] |
| rs201838 | 0.84[AMR][1000 genomes];1.00[ASN][1000 genomes] |
| rs201840 | 0.99[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs201841 | 0.89[AFR][1000 genomes];0.95[AMR][1000 genomes];0.88[EUR][1000 genomes];0.97[ASN][1000 genomes] |
| rs201882 | 0.95[ASN][1000 genomes] |
| rs201884 | 1.00[ASN][1000 genomes] |
| rs201885 | 1.00[ASN][1000 genomes] |
| rs201888 | 1.00[ASN][1000 genomes] |
| rs201893 | 0.97[ASN][1000 genomes] |
| rs201895 | 1.00[ASN][1000 genomes] |
| rs201896 | 1.00[ASN][1000 genomes] |
| rs201898 | 0.82[ASN][1000 genomes] |
| rs2419767 | 0.82[ASN][1000 genomes] |
| rs2450409 | 1.00[ASN][1000 genomes] |
| rs2467586 | 1.00[ASN][1000 genomes] |
| rs511851 | 1.00[ASN][1000 genomes] |
| rs7929459 | 0.90[ASN][1000 genomes] |
| rs7933841 | 0.90[ASN][1000 genomes] |
| No data |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr11:32597400-32604200 | Weak transcription | K562 | blood |
