Variant report

Variant	rs2022034
Chromosome Location	chr1:173236648-173236649
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr1:173231546..173234864-chr1:173235226..173238026,3	K562	blood:
2	chr1:173232698..173234864-chr1:173235226..173238026,2	K562	blood:

Extended variants
information (count: 12 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs1099449	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16845640	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2743808	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs844647	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs844650	1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs844652	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs844653	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs844656	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs844658	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs844661	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs844662	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs844664	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:21 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:173228200-173239400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr1:173235200-173240000	Enhancers	HSMM	muscle
3	chr1:173235800-173240600	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
4	chr1:173236000-173237600	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
5	chr1:173236000-173239000	Enhancers	Hela-S3	cervix
6	chr1:173236000-173240000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
7	chr1:173236000-173240200	Enhancers	HMEC	breast
8	chr1:173236200-173238400	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
9	chr1:173236200-173239600	Enhancers	NHDF-Ad	bronchial
10	chr1:173236200-173240000	Enhancers	Osteobl	bone
11	chr1:173236200-173240200	Enhancers	NH-A	brain
12	chr1:173236400-173236800	Flanking Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
13	chr1:173236400-173237000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
14	chr1:173236400-173237200	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
15	chr1:173236400-173238400	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
16	chr1:173236600-173237000	Enhancers	Dnd41	blood
17	chr1:173236600-173237400	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
18	chr1:173236600-173237400	Enhancers	GM12878-XiMat	blood
19	chr1:173236600-173239800	Enhancers	K562	blood
20	chr1:173236600-173240000	Enhancers	Muscle Satellite Cultured Cells	--
21	chr1:173236600-173240000	Enhancers	HSMMtube	muscle

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