Variant report

Variant rs2028657
Chromosome Location chr18:9589668-9589669
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr18:9545800-9595200 Strong transcription Dnd41 blood
2 chr18:9551000-9612200 Weak transcription Primary T killer memory cells from peripheral blood blood
3 chr18:9553800-9613600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
4 chr18:9563600-9591600 Weak transcription Colonic Mucosa Colon
5 chr18:9563600-9594800 Strong transcription Monocytes-CD14+_RO01746 blood
6 chr18:9565200-9594200 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
7 chr18:9566800-9592600 Strong transcription Primary Natural Killer cells fromperipheralblood blood
8 chr18:9566800-9594600 Strong transcription HSMM muscle
9 chr18:9570400-9594400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
10 chr18:9575800-9592800 Strong transcription HUES64 Cell Line embryonic stem cell
11 chr18:9576000-9594400 Strong transcription Primary neutrophils fromperipheralblood blood
12 chr18:9576200-9594000 Strong transcription Primary monocytes fromperipheralblood blood
13 chr18:9576200-9597800 Weak transcription iPS-15b Cell Line embryonic stem cell
14 chr18:9577600-9594400 Weak transcription Stomach Mucosa stomach
15 chr18:9578400-9595200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
16 chr18:9578600-9590800 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
17 chr18:9578800-9594800 Strong transcription iPS-20b Cell Line embryonic stem cell
18 chr18:9579000-9592600 Strong transcription Breast Myoepithelial Primary Cells Breast
19 chr18:9579000-9593800 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
20 chr18:9579600-9591400 Strong transcription HUES48 Cell Line embryonic stem cell
21 chr18:9579600-9594000 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
22 chr18:9579800-9593800 Strong transcription HUVEC blood vessel
23 chr18:9581000-9594000 Weak transcription Esophagus oesophagus
24 chr18:9581000-9595400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
25 chr18:9581200-9592800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
26 chr18:9581200-9593800 Weak transcription Aorta Aorta
27 chr18:9581400-9595800 Weak transcription Brain Angular Gyrus brain
28 chr18:9581400-9609200 Weak transcription Pancreas Pancrea
29 chr18:9582000-9594600 Weak transcription Psoas Muscle Psoas
30 chr18:9582000-9597000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
31 chr18:9582400-9594600 Weak transcription Pancreatic Islets Pancreatic Islet
32 chr18:9582800-9594200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
33 chr18:9582800-9594400 Weak transcription Rectal Smooth Muscle rectum
34 chr18:9582800-9594600 Weak transcription Fetal Heart heart
35 chr18:9582800-9597600 Weak transcription Fetal Brain Male brain
36 chr18:9583400-9593000 Strong transcription Primary hematopoietic stem cells short term culture blood
37 chr18:9583400-9594200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
38 chr18:9583400-9595000 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
39 chr18:9583600-9590000 Weak transcription Primary T helper naive cells fromperipheralblood blood
40 chr18:9583600-9592400 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
41 chr18:9583600-9595000 Weak transcription Brain Cingulate Gyrus brain
42 chr18:9584000-9593800 Strong transcription HMEC breast
43 chr18:9584400-9589800 Strong transcription Primary hematopoietic stem cells blood
44 chr18:9584400-9592200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
45 chr18:9584800-9594200 Weak transcription GM12878-XiMat blood
46 chr18:9584800-9596600 Weak transcription Primary T killer naive cells fromperipheralblood blood
47 chr18:9585000-9597200 Weak transcription ES-WA7 Cell Line embryonic stem cell
48 chr18:9586400-9593000 Strong transcription HUES6 Cell Line embryonic stem cell
49 chr18:9586400-9593000 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
50 chr18:9586400-9594000 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell

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