Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr13:93066301..93067843-chr13:93942958..93945920,2	K562	blood:

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs1023013	1.00[ASW][hapmap];0.92[CEU][hapmap];0.88[GIH][hapmap];0.82[MKK][hapmap];0.89[TSI][hapmap];0.94[YRI][hapmap];0.93[AFR][1000 genomes];0.88[EUR][1000 genomes]
rs1926608	0.84[EUR][1000 genomes]
rs1926610	0.86[CEU][hapmap];0.94[YRI][hapmap];0.91[AFR][1000 genomes]
rs1926613	0.81[CEU][hapmap]
rs2094475	0.80[ASN][1000 genomes]
rs2104624	0.92[CEU][hapmap];0.94[YRI][hapmap]
rs2209836	0.92[CEU][hapmap];0.94[YRI][hapmap];0.95[AFR][1000 genomes];0.92[EUR][1000 genomes]
rs2209839	0.84[CEU][hapmap]
rs2209840	0.88[CEU][hapmap];0.94[YRI][hapmap]
rs2225158	0.84[CEU][hapmap];0.89[MKK][hapmap];0.87[TSI][hapmap];0.94[YRI][hapmap];0.84[AFR][1000 genomes];0.84[EUR][1000 genomes]
rs2374006	0.88[EUR][1000 genomes]
rs2374009	0.92[CEU][hapmap]
rs2888720	0.84[CEU][hapmap]
rs4771859	0.92[CEU][hapmap];0.85[GIH][hapmap];0.84[TSI][hapmap]
rs4773682	0.92[CEU][hapmap];0.92[EUR][1000 genomes]
rs6492607	0.92[CEU][hapmap];0.88[GIH][hapmap];0.91[TSI][hapmap]
rs7317952	0.92[EUR][1000 genomes]
rs7318720	0.91[CHD][hapmap];0.80[ASN][1000 genomes]
rs7329163	0.83[GIH][hapmap]
rs7988626	0.85[AFR][1000 genomes];0.87[EUR][1000 genomes]
rs7996390	0.92[CEU][hapmap];0.91[EUR][1000 genomes]
rs927966	0.85[CHB][hapmap];0.82[JPT][hapmap];0.91[ASN][1000 genomes]
rs9301803	0.81[GIH][hapmap]
rs9516072	1.00[ASW][hapmap];0.92[CEU][hapmap];0.88[GIH][hapmap];0.86[LWK][hapmap];0.87[TSI][hapmap];0.89[YRI][hapmap];0.88[AFR][1000 genomes];0.86[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2756005	chr13:92584199-93080799	Enhancers Weak transcription Active TSS Bivalent Enhancer Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
2	nsv832680	chr13:93021114-93181489	Enhancers Weak transcription Active TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA	3 gene(s)	inside rSNPs	diseases

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs2031803	KCNJ11	trans	parietal	SCAN

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:93066000-93067200	Weak transcription	Fetal Lung	lung

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