Variant report

Variant	rs2032915
Chromosome Location	chr16:31117413-31117414
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	SP1	chr16:31117024-31117517	HepG2	liver:	n/a	chr16:31117487-31117494
2	MAX	chr16:31117046-31117530	ECC-1	luminal epithelium:	n/a	chr16:31117262-31117271 chr16:31117261-31117272
3	POLR2A	chr16:31117110-31117484	HepG2	liver:	n/a	n/a
4	ZKSCAN1	chr16:31117117-31117459	Hela-S3	cervix:	n/a	n/a
5	BHLHE40	chr16:31117045-31117426	GM12878	blood:	n/a	chr16:31117125-31117141
6	MYC	chr16:31117056-31117552	MCF-7	breast:	n/a	chr16:31117262-31117271 chr16:31117261-31117272
7	MAX	chr16:31117056-31117470	Hela-S3	cervix:	n/a	chr16:31117262-31117271 chr16:31117261-31117272
8	ATF3	chr16:31117023-31117527	HepG2	liver:	n/a	n/a
9	JUN	chr16:31117041-31117546	K562	blood:	n/a	n/a
10	MAX	chr16:31117028-31117503	K562	blood:	n/a	chr16:31117262-31117271 chr16:31117261-31117272
11	POLR2A	chr16:31117070-31117550	HepG2	liver:	n/a	n/a
12	HEY1	chr16:31117107-31117462	HepG2	liver:	n/a	n/a
13	MYC	chr16:31117017-31117457	Hela-S3	cervix:	n/a	chr16:31117262-31117271 chr16:31117261-31117272
14	MAX	chr16:31117044-31117515	H1-hESC	embryonic stem cell:	n/a	chr16:31117262-31117271 chr16:31117261-31117272
15	YY1	chr16:31117039-31117454	K562	blood:	n/a	chr16:31117255-31117264
16	MYC	chr16:31117042-31117475	K562	blood:	n/a	chr16:31117262-31117271 chr16:31117261-31117272
17	E2F6	chr16:31117074-31117482	K562	blood:	n/a	chr16:31117346-31117358 chr16:31117129-31117139 chr16:31117393-31117403
18	MAX	chr16:31117045-31117622	HepG2	liver:	n/a	chr16:31117262-31117271 chr16:31117261-31117272
19	RAD21	chr16:31117016-31117464	ECC-1	luminal epithelium:	n/a	chr16:31117126-31117139
20	FOSL2	chr16:31116934-31117459	HepG2	liver:	n/a	n/a
21	ZNF384	chr16:31116950-31117414	K562	blood:	n/a	n/a
22	CEBPB	chr16:31117221-31117551	A549	lung:	n/a	n/a
23	E2F6	chr16:31117035-31117500	K562	blood:	n/a	chr16:31117346-31117358 chr16:31117129-31117139 chr16:31117393-31117403
24	MAX	chr16:31117034-31117549	K562	blood:	n/a	chr16:31117262-31117271 chr16:31117261-31117272
25	RAD21	chr16:31117032-31117435	A549	lung:	n/a	chr16:31117126-31117139
26	E2F6	chr16:31117076-31117532	A549	lung:	n/a	chr16:31117346-31117358 chr16:31117129-31117139 chr16:31117393-31117403
27	RAD21	chr16:31117039-31117525	HCT-116	colon:	n/a	chr16:31117126-31117139
28	MAX	chr16:31116999-31117491	NB4	blood:	n/a	chr16:31117262-31117271 chr16:31117261-31117272
29	TBP	chr16:31117085-31117416	HepG2	liver:	n/a	n/a
30	EP300	chr16:31116974-31117583	HepG2	liver:	n/a	chr16:31117123-31117139 chr16:31117125-31117141 chr16:31117126-31117142
31	TCF12	chr16:31117017-31117493	HepG2	liver:	n/a	chr16:31117132-31117142
32	ZNF263	chr16:31117095-31117496	HEK293-T-REx	kidney:	n/a	n/a
33	NFIC	chr16:31117028-31117637	HepG2	liver:	n/a	n/a
34	HDAC2	chr16:31117022-31117555	HepG2	liver:	n/a	n/a
35	EP300	chr16:31117031-31117429	SK-N-SH_RA	brain:	n/a	chr16:31117123-31117139 chr16:31117125-31117141 chr16:31117126-31117142
36	CHD2	chr16:31117109-31117505	HepG2	liver:	n/a	n/a
37	MYBL2	chr16:31116914-31117629	HepG2	liver:	n/a	n/a
38	MYC	chr16:31116963-31117557	K562	blood:	n/a	chr16:31117262-31117271 chr16:31117261-31117272
39	MYC	chr16:31116996-31117498	K562	blood:	n/a	chr16:31117262-31117271 chr16:31117261-31117272
40	USF1	chr16:31117031-31117434	A549	lung:	n/a	chr16:31117125-31117141 chr16:31117260-31117271
41	MAX	chr16:31117057-31117504	SK-N-SH	brain:	n/a	chr16:31117262-31117271 chr16:31117261-31117272
42	YY1	chr16:31117055-31117417	K562	blood:	n/a	chr16:31117255-31117264
43	POLR2A	chr16:31117025-31117469	GM12892	blood:	n/a	n/a
44	POLR2A	chr16:31117054-31117555	HL-60	blood:	n/a	n/a
45	MAX	chr16:31117064-31117519	HepG2	liver:	n/a	chr16:31117262-31117271 chr16:31117261-31117272
46	PAX5	chr16:31117042-31117426	GM12892	blood:	n/a	n/a
47	MAX	chr16:31117009-31117520	HepG2	liver:	n/a	chr16:31117262-31117271 chr16:31117261-31117272
48	NFIC	chr16:31117020-31117500	ECC-1	luminal epithelium:	n/a	n/a
49	ZBTB7A	chr16:31116999-31117475	K562	blood:	n/a	n/a
50	CHD2	chr16:31117087-31117438	K562	blood:	n/a	n/a

No.	Distal block	Cell Line	Cell type
1	chr16:31115598..31118169-chr16:31120150..31122491,2	K562	blood:
2	chr16:30960093..30962910-chr16:31117078..31118783,2	K562	blood:
3	chr16:31116671..31117702-chr16:31153398..31154356,8	MCF-7	breast:
4	chr16:31115614..31117488-chr16:31191253..31194151,3	MCF-7	breast:

Variant related genes	Relation type
ENSG00000252809	TF binding region
BCKDK	TF binding region
ENSG00000252809	Chromatin interaction
ENSG00000089280	Chromatin interaction
ENSG00000178226	Chromatin interaction
ENSG00000175938	Chromatin interaction
ENSG00000103507	Chromatin interaction

Extended variants
information (count: 139 )
Associated
traits (count: 11 )

rSNPs within LD-proxies of this variant (count:125)

rs_ID	r²[population]
rs1060506	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs10782001	0.89[JPT][hapmap]
rs10782002	0.89[JPT][hapmap]
rs10871454	1.00[CEU][hapmap];1.00[CHD][hapmap];0.96[GIH][hapmap];1.00[JPT][hapmap];0.92[MEX][hapmap];0.85[TSI][hapmap];0.80[ASN][1000 genomes]
rs11076	0.88[JPT][hapmap]
rs1108431	0.84[ASN][1000 genomes]
rs11150600	0.89[JPT][hapmap]
rs11150601	0.89[JPT][hapmap]
rs11150604	1.00[CEU][hapmap];1.00[CHD][hapmap];0.84[GIH][hapmap];1.00[JPT][hapmap];0.92[MEX][hapmap];0.85[TSI][hapmap];0.84[ASN][1000 genomes]
rs11640534	0.89[JPT][hapmap]
rs11640767	0.82[ASN][1000 genomes]
rs11640957	0.82[ASN][1000 genomes]
rs11640961	1.00[ASW][hapmap];0.87[CEU][hapmap];0.81[GIH][hapmap];0.89[JPT][hapmap];1.00[LWK][hapmap];0.82[MKK][hapmap]
rs11642192	0.93[ASN][1000 genomes]
rs11647284	0.95[ASN][1000 genomes]
rs11647442	0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11649653	1.00[ASW][hapmap];1.00[JPT][hapmap]
rs11862744	1.00[CHD][hapmap];1.00[JPT][hapmap];0.84[ASN][1000 genomes]
rs11864806	0.95[ASN][1000 genomes]
rs11864839	1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[ASN][1000 genomes]
rs11865038	1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[ASN][1000 genomes]
rs11865499	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs12102776	0.82[CHB][hapmap];0.92[CHD][hapmap]
rs12445650	1.00[JPT][hapmap];0.84[ASN][1000 genomes]
rs12448321	0.84[ASN][1000 genomes]
rs12597511	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap];0.96[MEX][hapmap];0.95[TSI][hapmap];0.88[AMR][1000 genomes];0.94[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12716981	0.85[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12716982	0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12924903	1.00[JPT][hapmap]
rs12928852	0.89[JPT][hapmap]
rs12931046	0.89[JPT][hapmap]
rs12934418	0.84[ASN][1000 genomes]
rs13708	0.89[JPT][hapmap]
rs14235	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1458202	0.89[JPT][hapmap]
rs1549293	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.88[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17839567	0.84[ASN][1000 genomes]
rs17839568	0.95[ASN][1000 genomes]
rs1870293	0.89[JPT][hapmap]
rs1978485	0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1978487	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.96[GIH][hapmap];1.00[JPT][hapmap];0.88[MEX][hapmap];0.91[TSI][hapmap];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2054213	0.89[JPT][hapmap]
rs2288004	0.84[ASN][1000 genomes]
rs2303222	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap];0.84[MEX][hapmap];0.95[ASN][1000 genomes]
rs2303223	1.00[CEU][hapmap];1.00[JPT][hapmap];0.86[AFR][1000 genomes];0.93[ASN][1000 genomes]
rs2305880	0.89[JPT][hapmap]
rs2305884	0.89[JPT][hapmap]
rs2359612	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.96[GIH][hapmap];1.00[JPT][hapmap];0.96[MEX][hapmap];0.87[TSI][hapmap];0.83[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2855475	0.87[CEU][hapmap];1.00[CHB][hapmap];0.96[GIH][hapmap];1.00[JPT][hapmap];0.98[TSI][hapmap];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28725459	0.96[ASN][1000 genomes]
rs28814987	0.95[ASN][1000 genomes]
rs2884737	1.00[LWK][hapmap];1.00[MKK][hapmap]
rs2884738	1.00[ASN][1000 genomes]
rs34649473	0.81[ASN][1000 genomes]
rs35351013	0.86[AFR][1000 genomes];0.89[ASN][1000 genomes]
rs35468353	1.00[CHD][hapmap];1.00[JPT][hapmap];0.84[ASN][1000 genomes]
rs35675346	1.00[JPT][hapmap]
rs35713203	0.95[ASN][1000 genomes]
rs3751855	1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[ASN][1000 genomes]
rs4468641	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.95[ASN][1000 genomes]
rs4527034	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[TSI][hapmap];0.85[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4889525	0.89[JPT][hapmap]
rs4889530	0.82[ASN][1000 genomes]
rs4889599	0.89[JPT][hapmap]
rs4889603	1.00[ASW][hapmap];0.84[CEU][hapmap];0.81[GIH][hapmap];0.89[JPT][hapmap];1.00[LWK][hapmap];0.82[MKK][hapmap]
rs4889604	0.89[JPT][hapmap]
rs4889606	0.96[CEU][hapmap];0.81[GIH][hapmap];0.89[JPT][hapmap];0.92[MEX][hapmap];0.87[TSI][hapmap]
rs4889609	1.00[JPT][hapmap]
rs4889619	0.88[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs4889620	0.89[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4889623	0.82[CHB][hapmap]
rs55766044	1.00[ASN][1000 genomes]
rs55979739	0.84[ASN][1000 genomes]
rs56284083	0.84[ASN][1000 genomes]
rs56314408	0.81[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56813533	0.89[ASN][1000 genomes]
rs57434408	0.86[ASN][1000 genomes]
rs58726213	0.82[ASN][1000 genomes]
rs59061704	0.82[ASN][1000 genomes]
rs59735493	1.00[ASN][1000 genomes]
rs60996860	0.96[ASN][1000 genomes]
rs61162043	0.90[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs61320757	1.00[ASN][1000 genomes]
rs6565217	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.95[ASN][1000 genomes]
rs6950	0.89[JPT][hapmap]
rs7187995	0.89[ASN][1000 genomes]
rs7190802	0.82[CHB][hapmap]
rs7196161	0.89[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7196726	1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[ASN][1000 genomes]
rs7197717	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.95[ASN][1000 genomes]
rs7199949	1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[ASN][1000 genomes]
rs7200879	1.00[JPT][hapmap]
rs7203999	0.82[CHD][hapmap];0.89[JPT][hapmap]
rs7204459	0.89[JPT][hapmap]
rs7206511	0.89[JPT][hapmap]
rs7294	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.95[ASN][1000 genomes]
rs729482	1.00[JPT][hapmap]
rs732172	1.00[CHD][hapmap];1.00[JPT][hapmap];0.84[ASN][1000 genomes]
rs732173	0.84[ASN][1000 genomes]
rs73530203	0.93[ASN][1000 genomes]
rs749670	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[AFR][1000 genomes];0.80[AMR][1000 genomes];0.80[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs749671	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.96[GIH][hapmap];1.00[JPT][hapmap];0.87[MEX][hapmap];0.86[TSI][hapmap];0.95[ASN][1000 genomes]
rs749767	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.96[GIH][hapmap];1.00[JPT][hapmap];0.87[MEX][hapmap];0.91[TSI][hapmap];0.81[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7500176	0.84[ASN][1000 genomes]
rs750952	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.95[ASN][1000 genomes]
rs8047803	0.95[ASN][1000 genomes]
rs8050588	0.89[JPT][hapmap]
rs8050894	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[ASN][1000 genomes]
rs8056842	1.00[JPT][hapmap];0.84[ASN][1000 genomes]
rs8060857	0.89[JPT][hapmap]
rs8061047	0.89[ASN][1000 genomes]
rs8062719	0.89[JPT][hapmap]
rs881929	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.96[GIH][hapmap];1.00[JPT][hapmap];0.92[MEX][hapmap];0.87[TSI][hapmap];0.95[ASN][1000 genomes]
rs889548	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.86[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs889555	1.00[CHB][hapmap];0.92[CHD][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs897986	0.89[JPT][hapmap]
rs9923231	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.96[GIH][hapmap];1.00[JPT][hapmap];0.96[MEX][hapmap];0.87[TSI][hapmap];0.83[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9925964	1.00[CEU][hapmap];0.90[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9926533	0.96[CEU][hapmap];0.82[CHD][hapmap];0.81[GIH][hapmap];0.89[JPT][hapmap];0.92[MEX][hapmap];0.82[TSI][hapmap]
rs9929899	0.82[ASN][1000 genomes]
rs9934438	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.96[GIH][hapmap];1.00[JPT][hapmap];0.96[MEX][hapmap];0.87[TSI][hapmap];0.83[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9936329	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.86[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9939417	1.00[CEU][hapmap];1.00[CHD][hapmap];0.96[GIH][hapmap];1.00[JPT][hapmap];0.92[MEX][hapmap];0.87[TSI][hapmap];0.84[ASN][1000 genomes]
rs9939558	0.84[ASN][1000 genomes]
rs9972727	0.81[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:14 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1062456	chr16:30442166-31253997	Weak transcription Flanking Active TSS Enhancers Strong transcription Active TSS Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	437 gene(s)	inside rSNPs	diseases
2	nsv542898	chr16:30442166-31253997	Enhancers Active TSS Strong transcription Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	437 gene(s)	inside rSNPs	diseases
3	nsv905729	chr16:30642867-31247924	Active TSS Bivalent/Poised TSS Flanking Active TSS Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Strong transcription Genic enhancers Weak transcription Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	387 gene(s)	inside rSNPs	diseases
4	nsv431451	chr16:30682399-31340999	Transcr. at gene 5' and 3' Genic enhancers Weak transcription Flanking Active TSS Strong transcription Active TSS Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	350 gene(s)	inside rSNPs	diseases
5	nsv905734	chr16:30877544-31191482	Active TSS Strong transcription Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	271 gene(s)	inside rSNPs	diseases
6	nsv905735	chr16:30890538-31247924	Strong transcription Genic enhancers Active TSS Weak transcription Flanking Active TSS Bivalent Enhancer Enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	264 gene(s)	inside rSNPs	diseases
7	nsv457483	chr16:30903679-31191482	Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Genic enhancers Strong transcription Enhancers ZNF genes & repeats Weak transcription Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	253 gene(s)	inside rSNPs	diseases
8	nsv571820	chr16:30903679-31191482	Enhancers Genic enhancers Bivalent/Poised TSS Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer Strong transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	253 gene(s)	inside rSNPs	diseases
9	esv1797877	chr16:30948643-31188432	Flanking Active TSS Enhancers Weak transcription Strong transcription Active TSS Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	114 gene(s)	inside rSNPs	diseases
10	nsv833193	chr16:30960796-31133604	Enhancers Active TSS Weak transcription Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Strong transcription Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	109 gene(s)	inside rSNPs	diseases
11	nsv905740	chr16:31066249-31232437	Flanking Active TSS Enhancers Weak transcription Strong transcription Transcr. at gene 5' and 3' Active TSS Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	202 gene(s)	inside rSNPs	diseases
12	nsv905741	chr16:31066249-31247924	Genic enhancers Weak transcription Flanking Active TSS Active TSS Enhancers Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	202 gene(s)	inside rSNPs	diseases
13	nsv905742	chr16:31102321-31247924	Weak transcription Active TSS Strong transcription Flanking Active TSS Enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	188 gene(s)	inside rSNPs	diseases
14	nsv905743	chr16:31111064-31129942	Genic enhancers Weak transcription Active TSS Enhancers Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	35 gene(s)	inside rSNPs	diseases

mRNA abundance (count:11)

SNP	Gene	Cis/trans	Tissue	Source
rs2032915	MYST1	cis	parietal	SCAN
rs2032915	STX1B	cis	cerebellum	SCAN
rs2032915	RP11-196G11.2	cis	Muscle Skeletal	GTEx
rs2032915	ZNF668	cis	cerebellum	SCAN
rs2032915	YPEL3	cis	cerebellum	SCAN
rs2032915	NCRNA00095	cis	cerebellum	SCAN
rs2032915	MYST1	cis	cerebellum	SCAN
rs2032915	HSD3B7	cis	Whole Blood	GTEx
rs2032915	KAT8	cis	Artery Tibial	GTEx
rs2032915	KAT8	cis	Skin Sun Exposed Lower leg	GTEx
rs2032915	ZNF668	cis	Whole Blood	GTEx

Chromatin state (count:100 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr16:31112800-31119200	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
2	chr16:31113000-31119400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
3	chr16:31114600-31119400	Weak transcription	Lung	lung
4	chr16:31116400-31119000	Weak transcription	Primary T killer memory cells from peripheral blood	blood
5	chr16:31117000-31117600	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
6	chr16:31117000-31117600	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
7	chr16:31117000-31117600	Enhancers	Primary B cells from peripheral blood	blood
8	chr16:31117000-31117600	Enhancers	Primary T cells fromperipheralblood	blood
9	chr16:31117000-31117600	Active TSS	Foreskin Fibroblast Primary Cells skin02	Skin
10	chr16:31117000-31117600	Enhancers	Fetal Muscle Trunk	muscle
11	chr16:31117000-31117600	Enhancers	Placenta	Placenta
12	chr16:31117200-31117600	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
13	chr16:31117200-31117600	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
14	chr16:31117200-31117600	Enhancers	Breast Myoepithelial Primary Cells	Breast
15	chr16:31117200-31117600	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
16	chr16:31117200-31117600	Flanking Active TSS	Primary neutrophils fromperipheralblood	blood
17	chr16:31117200-31117600	Enhancers	Primary hematopoietic stem cells	blood
18	chr16:31117200-31117600	Enhancers	Primary hematopoietic stem cells short term culture	blood
19	chr16:31117200-31117600	Enhancers	Primary T helper naive cells fromperipheralblood	blood
20	chr16:31117200-31117600	Enhancers	Primary T helper cells PMA-I stimulated	--
21	chr16:31117200-31117600	Enhancers	Primary T killer naive cells fromperipheralblood	blood
22	chr16:31117200-31117600	Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
23	chr16:31117200-31117600	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--
24	chr16:31117200-31117600	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
25	chr16:31117200-31117600	Enhancers	Muscle Satellite Cultured Cells	--
26	chr16:31117200-31117600	Flanking Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
27	chr16:31117200-31117600	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
28	chr16:31117200-31117600	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
29	chr16:31117200-31117600	Enhancers	Adipose Nuclei	Adipose
30	chr16:31117200-31117600	Active TSS	Colonic Mucosa	Colon
31	chr16:31117200-31117600	Active TSS	Duodenum Smooth Muscle	Duodenum
32	chr16:31117200-31117600	Enhancers	Fetal Intestine Large	intestine
33	chr16:31117200-31117600	Enhancers	Fetal Intestine Small	intestine
34	chr16:31117200-31117600	Enhancers	Fetal Muscle Leg	muscle
35	chr16:31117200-31117600	Enhancers	Fetal Thymus	thymus
36	chr16:31117200-31117600	Enhancers	Pancreas	Pancrea
37	chr16:31117200-31117600	Enhancers	Rectal Mucosa Donor 29	rectum
38	chr16:31117200-31117600	Flanking Active TSS	Rectal Mucosa Donor 31	rectum
39	chr16:31117200-31117600	Enhancers	Sigmoid Colon	Sigmoid Colon
40	chr16:31117200-31117600	Flanking Active TSS	Skeletal Muscle Male	skeletal muscle
41	chr16:31117200-31117600	Flanking Active TSS	Skeletal Muscle Female	skeletal muscle
42	chr16:31117200-31117600	Enhancers	Stomach Smooth Muscle	stomach
43	chr16:31117200-31117600	Flanking Active TSS	Hela-S3	cervix
44	chr16:31117200-31117600	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
45	chr16:31117200-31117600	Enhancers	NHDF-Ad	bronchial
46	chr16:31117200-31117600	Enhancers	NHLF	lung
47	chr16:31117200-31117600	Enhancers	Osteobl	bone
48	chr16:31117200-31117800	Enhancers	Primary monocytes fromperipheralblood	blood
49	chr16:31117200-31117800	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
50	chr16:31117400-31117600	Enhancers	HUES64 Cell Line	embryonic stem cell

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