Variant report

Variant rs7200879
Chromosome Location chr16:30947572-30947573
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:116 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr16:30936000-30953400 Weak transcription Right Atrium heart
2 chr16:30936400-30955200 Weak transcription Fetal Kidney kidney
3 chr16:30936400-30955800 Weak transcription Small Intestine intestine
4 chr16:30936600-30952800 Weak transcription Hela-S3 cervix
5 chr16:30936600-30953000 Weak transcription Stomach Mucosa stomach
6 chr16:30937400-30947600 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
7 chr16:30937400-30949400 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
8 chr16:30937600-30951800 Strong transcription HUES64 Cell Line embryonic stem cell
9 chr16:30937600-30958600 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
10 chr16:30937800-30953000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
11 chr16:30938000-30947800 Strong transcription Thymus Thymus
12 chr16:30938200-30953000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
13 chr16:30939200-30949600 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
14 chr16:30939200-30953000 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
15 chr16:30939400-30949000 Strong transcription Fetal Muscle Trunk muscle
16 chr16:30939400-30949000 Strong transcription Fetal Muscle Leg muscle
17 chr16:30939400-30949400 Strong transcription Cortex derived primary cultured neurospheres brain
18 chr16:30939400-30958800 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
19 chr16:30939600-30948800 Strong transcription Placenta Placenta
20 chr16:30939600-30949400 Strong transcription Fetal Stomach stomach
21 chr16:30939600-30949800 Strong transcription Fetal Brain Female brain
22 chr16:30939600-30950400 Strong transcription H1 Cell Line embryonic stem cell
23 chr16:30939600-30959000 Strong transcription Brain Germinal Matrix brain
24 chr16:30940000-30949200 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
25 chr16:30940000-30953000 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
26 chr16:30940200-30949200 Strong transcription iPS-18 Cell Line embryonic stem cell
27 chr16:30940400-30948200 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
28 chr16:30940400-30951000 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
29 chr16:30940600-30950000 Strong transcription Breast Myoepithelial Primary Cells Breast
30 chr16:30942400-30953200 Weak transcription Colonic Mucosa Colon
31 chr16:30942400-30959600 Weak transcription Psoas Muscle Psoas
32 chr16:30942800-30953000 Weak transcription Primary T helper naive cells fromperipheralblood blood
33 chr16:30943200-30952200 Weak transcription GM12878-XiMat blood
34 chr16:30943800-30948600 Weak transcription Primary hematopoietic stem cells blood
35 chr16:30943800-30951000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
36 chr16:30943800-30952800 Weak transcription Brain Angular Gyrus brain
37 chr16:30943800-30955000 Weak transcription Fetal Brain Male brain
38 chr16:30944000-30949000 Weak transcription Rectal Smooth Muscle rectum
39 chr16:30944000-30951000 Weak transcription NH-A brain
40 chr16:30944000-30951400 Strong transcription Fetal Intestine Large intestine
41 chr16:30944000-30951800 Weak transcription HUVEC blood vessel
42 chr16:30944000-30952800 Strong transcription Fetal Intestine Small intestine
43 chr16:30944000-30953000 Weak transcription Colon Smooth Muscle Colon
44 chr16:30944000-30953000 Weak transcription NHDF-Ad bronchial
45 chr16:30944000-30953200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
46 chr16:30944000-30953400 Weak transcription Liver Liver
47 chr16:30944200-30948400 Weak transcription A549 lung
48 chr16:30944200-30948400 Weak transcription HSMMtube muscle
49 chr16:30944200-30948800 Weak transcription Right Ventricle heart
50 chr16:30944200-30949000 Weak transcription Primary neutrophils fromperipheralblood blood

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