Variant report

Variant rs2855475
Chromosome Location chr16:31147548-31147549
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:98 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr16:31130400-31153000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
2 chr16:31135800-31153000 Weak transcription Primary T killer naive cells fromperipheralblood blood
3 chr16:31139400-31153200 Weak transcription Primary T killer memory cells from peripheral blood blood
4 chr16:31140400-31152800 Weak transcription GM12878-XiMat blood
5 chr16:31141400-31149600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
6 chr16:31141400-31149800 Weak transcription HSMMtube muscle
7 chr16:31141800-31149800 Weak transcription HSMM muscle
8 chr16:31142200-31153200 Weak transcription Primary T helper naive cells from peripheral blood blood
9 chr16:31142800-31150200 Weak transcription Psoas Muscle Psoas
10 chr16:31143000-31153200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
11 chr16:31143400-31150200 Weak transcription Aorta Aorta
12 chr16:31143600-31150000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
13 chr16:31143600-31153200 Weak transcription Primary T cells from cord blood blood
14 chr16:31143800-31149800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
15 chr16:31143800-31153000 Weak transcription Primary T cells fromperipheralblood blood
16 chr16:31143800-31153400 Weak transcription Primary T regulatory cells fromperipheralblood blood
17 chr16:31144000-31152800 Weak transcription Ovary ovary
18 chr16:31144000-31153200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
19 chr16:31144200-31152400 Weak transcription Dnd41 blood
20 chr16:31144200-31153000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
21 chr16:31144400-31153000 Weak transcription Primary B cells from peripheral blood blood
22 chr16:31144400-31153000 Weak transcription Primary T helper cells PMA-I stimulated --
23 chr16:31144600-31152400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
24 chr16:31144600-31152600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
25 chr16:31144800-31152800 Weak transcription Primary T helper naive cells fromperipheralblood blood
26 chr16:31144800-31152800 Weak transcription Thymus Thymus
27 chr16:31144800-31153200 Weak transcription Primary T helper cells fromperipheralblood blood
28 chr16:31144800-31153600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
29 chr16:31145200-31147600 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
30 chr16:31145200-31152800 Weak transcription Brain Inferior Temporal Lobe brain
31 chr16:31145600-31147600 Active TSS Fetal Kidney kidney
32 chr16:31145800-31147600 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
33 chr16:31145800-31149800 Weak transcription Spleen Spleen
34 chr16:31145800-31152000 Weak transcription NHLF lung
35 chr16:31145800-31153000 Weak transcription Brain Cingulate Gyrus brain
36 chr16:31146400-31147600 Enhancers Fetal Lung lung
37 chr16:31146400-31147600 Flanking Bivalent TSS/Enh HepG2 liver
38 chr16:31146400-31147800 Bivalent Enhancer Brain Germinal Matrix brain
39 chr16:31146400-31149600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
40 chr16:31146400-31149600 Weak transcription Left Ventricle heart
41 chr16:31146400-31149600 Weak transcription Right Atrium heart
42 chr16:31146400-31149600 Weak transcription Right Ventricle heart
43 chr16:31146400-31149800 Weak transcription Osteobl bone
44 chr16:31146400-31153000 Weak transcription Brain Substantia Nigra brain
45 chr16:31146600-31149600 Weak transcription NH-A brain
46 chr16:31146600-31152000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
47 chr16:31147000-31147600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
48 chr16:31147000-31147600 Bivalent Enhancer Foreskin Fibroblast Primary Cells skin01 Skin
49 chr16:31147000-31147600 Enhancers Gastric stomach
50 chr16:31147000-31147600 Enhancers Sigmoid Colon Sigmoid Colon

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