Variant report

Variant	rs2033393
Chromosome Location	chr9:104040972-104040973
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 17 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:17)

rs_ID	r²[population]
rs10989462	0.97[ASN][1000 genomes]
rs12341316	0.98[ASN][1000 genomes]
rs12683367	0.86[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13289023	0.98[ASN][1000 genomes]
rs1329077	0.98[ASN][1000 genomes]
rs1329079	0.98[ASN][1000 genomes]
rs13296052	0.97[ASN][1000 genomes]
rs2033394	0.84[ASN][1000 genomes]
rs2039128	0.86[ASN][1000 genomes]
rs35870850	0.83[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs3944892	0.85[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4743456	0.95[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7023477	0.98[ASN][1000 genomes]
rs7029850	0.86[ASN][1000 genomes]
rs7034058	0.98[ASN][1000 genomes]
rs7035407	0.84[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7047759	0.82[ASN][1000 genomes]

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:104032400-104042000	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
2	chr9:104038200-104054000	Weak transcription	Fetal Brain Male	brain
3	chr9:104039200-104050000	Weak transcription	HepG2	liver
4	chr9:104040800-104041400	ZNF genes & repeats	Breast Myoepithelial Primary Cells	Breast

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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