Variant report

Variant	rs1329079
Chromosome Location	chr9:104039011-104039012
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 24 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs10125731	0.84[JPT][hapmap]
rs10989462	0.96[CEU][hapmap];1.00[CHB][hapmap];0.91[JPT][hapmap];0.91[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs11790209	0.80[JPT][hapmap]
rs11792655	0.85[JPT][hapmap]
rs12341244	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs12341316	0.96[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];0.91[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12683367	0.98[ASN][1000 genomes]
rs12683393	0.85[JPT][hapmap]
rs13289023	0.96[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];0.89[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1329077	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13296052	0.96[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];0.86[YRI][hapmap];0.94[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1891219	0.80[JPT][hapmap]
rs2033393	0.98[ASN][1000 genomes]
rs2033394	0.90[CHB][hapmap];0.86[ASN][1000 genomes]
rs2039128	0.90[CHB][hapmap];0.84[ASN][1000 genomes]
rs35870850	0.98[AFR][1000 genomes];0.98[ASN][1000 genomes]
rs3944892	1.00[CHB][hapmap];0.95[JPT][hapmap];0.98[ASN][1000 genomes]
rs4743456	0.98[ASN][1000 genomes]
rs6479049	0.83[JPT][hapmap]
rs7023477	0.96[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7029850	0.84[ASN][1000 genomes]
rs7034058	0.96[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];0.89[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7035407	1.00[CHB][hapmap];0.95[JPT][hapmap];0.98[ASN][1000 genomes]
rs7047759	0.85[CHB][hapmap];0.83[ASN][1000 genomes]

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:104032400-104040800	Weak transcription	Breast Myoepithelial Primary Cells	Breast
2	chr9:104032400-104042000	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
3	chr9:104036600-104039200	Enhancers	Brain Anterior Caudate	brain
4	chr9:104038000-104039200	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
5	chr9:104038200-104054000	Weak transcription	Fetal Brain Male	brain
6	chr9:104038800-104039200	Enhancers	HepG2	liver

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