Variant report

Variant	rs2045739
Chromosome Location	chr14:84690867-84690868
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 20 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs10145113	0.93[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs11159634	1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs11159635	1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12590599	1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12590626	1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12590652	0.84[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12590669	1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1676065	1.00[EUR][1000 genomes]
rs1779579	1.00[EUR][1000 genomes]
rs2045740	0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs58632727	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs67304290	0.80[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7157123	1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7157150	1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs72629343	1.00[EUR][1000 genomes]
rs72629346	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs72629347	0.80[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs72629348	1.00[AFR][1000 genomes];0.82[AMR][1000 genomes];1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs72629351	0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3373447	chr14:84689099-84691047	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:84690600-84693000	Enhancers	Fetal Stomach	stomach
2	chr14:84690800-84691200	Weak transcription	Rectal Smooth Muscle	rectum
3	chr14:84690800-84691400	Enhancers	Colon Smooth Muscle	Colon

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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