Variant report
| Variant | rs2066408 |
|---|---|
| Chromosome Location | chr6:119342234-119342235 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr6:119292400-119344000 | Weak transcription | Brain Germinal Matrix | brain |
| 2 | chr6:119293200-119345400 | Weak transcription | Lung | lung |
| 3 | chr6:119300600-119344000 | Weak transcription | HUES48 Cell Line | embryonic stem cell |
| 4 | chr6:119300800-119342600 | Weak transcription | Brain Anterior Caudate | brain |
| 5 | chr6:119314400-119364400 | Weak transcription | Fetal Muscle Trunk | muscle |
| 6 | chr6:119318600-119344200 | Weak transcription | Fetal Lung | lung |
| 7 | chr6:119319800-119342600 | Weak transcription | Primary T regulatory cells fromperipheralblood | blood |
| 8 | chr6:119325400-119349600 | Weak transcription | Brain Angular Gyrus | brain |
| 9 | chr6:119328600-119348800 | Weak transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 10 | chr6:119329200-119343400 | Weak transcription | Primary T helper naive cells fromperipheralblood | blood |
| 11 | chr6:119330200-119342400 | Weak transcription | Liver | Liver |
| 12 | chr6:119330400-119347000 | Weak transcription | Fetal Muscle Leg | muscle |
| 13 | chr6:119330800-119342800 | Weak transcription | Fetal Intestine Small | intestine |
| 14 | chr6:119331000-119344200 | Weak transcription | Gastric | stomach |
| 15 | chr6:119331000-119344400 | Weak transcription | Fetal Brain Female | brain |
| 16 | chr6:119331400-119345200 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 17 | chr6:119331400-119345800 | Weak transcription | Primary T helper cells fromperipheralblood | blood |
| 18 | chr6:119331400-119349800 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 19 | chr6:119331400-119356000 | Weak transcription | Ovary | ovary |
| 20 | chr6:119331600-119349200 | Weak transcription | Adipose Nuclei | Adipose |
| 21 | chr6:119331600-119355800 | Weak transcription | K562 | blood |
| 22 | chr6:119332400-119344200 | Weak transcription | HUES64 Cell Line | embryonic stem cell |
| 23 | chr6:119334200-119355800 | Weak transcription | Brain Hippocampus Middle | brain |
| 24 | chr6:119334800-119347000 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 25 | chr6:119336400-119345400 | Weak transcription | Pancreas | Pancrea |
| 26 | chr6:119336800-119344000 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 27 | chr6:119337800-119345200 | Weak transcription | H1 Cell Line | embryonic stem cell |
| 28 | chr6:119338000-119344000 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
| 29 | chr6:119338000-119344200 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 30 | chr6:119339400-119356200 | Weak transcription | Placenta | Placenta |
| 31 | chr6:119339600-119344000 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
| 32 | chr6:119339600-119344200 | Weak transcription | iPS-20b Cell Line | embryonic stem cell |
| 33 | chr6:119340200-119347000 | Weak transcription | H9 Cell Line | embryonic stem cell |
| 34 | chr6:119340400-119343800 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
| 35 | chr6:119340600-119344000 | Strong transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 36 | chr6:119341200-119342800 | Strong transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
| 37 | chr6:119341400-119346200 | Transcr. at gene 5' and 3' | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 38 | chr6:119341400-119356200 | Weak transcription | Fetal Stomach | stomach |
| 39 | chr6:119341600-119343400 | Strong transcription | Breast Myoepithelial Primary Cells | Breast |
| 40 | chr6:119341600-119344000 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
