The 2.0 version of rSNPBase

Variant report

Variant rs9489577
Chromosome Location chr6:119338585-119338586
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:43 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:119285800-119340000 Weak transcription Fetal Brain Male brain
2 chr6:119292400-119344000 Weak transcription Brain Germinal Matrix brain
3 chr6:119293200-119345400 Weak transcription Lung lung
4 chr6:119300600-119344000 Weak transcription HUES48 Cell Line embryonic stem cell
5 chr6:119300800-119342600 Weak transcription Brain Anterior Caudate brain
6 chr6:119314400-119364400 Weak transcription Fetal Muscle Trunk muscle
7 chr6:119318600-119344200 Weak transcription Fetal Lung lung
8 chr6:119319800-119342600 Weak transcription Primary T regulatory cells fromperipheralblood blood
9 chr6:119325200-119339800 Weak transcription Primary T cells from cord blood blood
10 chr6:119325400-119349600 Weak transcription Brain Angular Gyrus brain
11 chr6:119328600-119348800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
12 chr6:119329200-119343400 Weak transcription Primary T helper naive cells fromperipheralblood blood
13 chr6:119330200-119342400 Weak transcription Liver Liver
14 chr6:119330400-119347000 Weak transcription Fetal Muscle Leg muscle
15 chr6:119330800-119342800 Weak transcription Fetal Intestine Small intestine
16 chr6:119331000-119344200 Weak transcription Gastric stomach
17 chr6:119331000-119344400 Weak transcription Fetal Brain Female brain
18 chr6:119331200-119340600 Weak transcription Left Ventricle heart
19 chr6:119331400-119338800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
20 chr6:119331400-119345200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
21 chr6:119331400-119345800 Weak transcription Primary T helper cells fromperipheralblood blood
22 chr6:119331400-119349800 Weak transcription Brain Inferior Temporal Lobe brain
23 chr6:119331400-119356000 Weak transcription Ovary ovary
24 chr6:119331600-119341600 Weak transcription Breast Myoepithelial Primary Cells Breast
25 chr6:119331600-119349200 Weak transcription Adipose Nuclei Adipose
26 chr6:119331600-119355800 Weak transcription K562 blood
27 chr6:119332400-119344200 Weak transcription HUES64 Cell Line embryonic stem cell
28 chr6:119334200-119355800 Weak transcription Brain Hippocampus Middle brain
29 chr6:119334800-119347000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
30 chr6:119336200-119340400 Strong transcription Cortex derived primary cultured neurospheres brain
31 chr6:119336400-119338800 Weak transcription HUES6 Cell Line embryonic stem cell
32 chr6:119336400-119345400 Weak transcription Pancreas Pancrea
33 chr6:119336800-119344000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
34 chr6:119337000-119340400 Weak transcription Fetal Intestine Large intestine
35 chr6:119337200-119339600 Strong transcription iPS-20b Cell Line embryonic stem cell
36 chr6:119337600-119341400 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
37 chr6:119337800-119339400 Strong transcription Placenta Placenta
38 chr6:119337800-119341600 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
39 chr6:119337800-119345200 Weak transcription H1 Cell Line embryonic stem cell
40 chr6:119338000-119344000 Weak transcription iPS-18 Cell Line embryonic stem cell
41 chr6:119338000-119344200 Weak transcription iPS-15b Cell Line embryonic stem cell
42 chr6:119338200-119340200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
43 chr6:119338400-119341600 Weak transcription HepG2 liver

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Last update: Aug 31, 2015