Variant report

Variant	rs2092691
Chromosome Location	chr14:68136287-68136288
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr14:68083805..68088096-chr14:68136243..68139181,3	MCF-7	breast:
2	chr14:68134983..68137070-chr14:68155296..68156947,2	MCF-7	breast:
3	chr14:68051111..68055342-chr14:68135625..68139936,6	K562	blood:
4	chr14:68133955..68137188-chr14:68149480..68152660,3	MCF-7	breast:
5	chr14:68132783..68137458-chr14:68138173..68142358,7	MCF-7	breast:

Variant related genes	Relation type
ENSG00000081181	Chromatin interaction
ENSG00000054690	Chromatin interaction
ENSG00000201529	Chromatin interaction
ENSG00000100568	Chromatin interaction

Extended variants
information (count: 27 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:26)

rs_ID	r²[population]
rs10129402	1.00[AMR][1000 genomes]
rs10148493	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10148929	1.00[AMR][1000 genomes]
rs10150303	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs11625247	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs12435419	1.00[AMR][1000 genomes]
rs12882546	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs12894770	1.00[AMR][1000 genomes]
rs1474796	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs1535088	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs1955467	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs1955471	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs2320028	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs4899223	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs4902505	1.00[AFR][1000 genomes]
rs4902513	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6573798	1.00[AMR][1000 genomes]
rs7143260	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7147365	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7147404	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7157923	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7159735	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs8006137	1.00[AMR][1000 genomes]
rs8011138	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs8017085	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs8017290	0.85[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv902068	chr14:68083133-68204876	Weak transcription Enhancers Active TSS Flanking Active TSS Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	36 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:121 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:68117000-68139400	Weak transcription	Psoas Muscle	Psoas
2	chr14:68119400-68140400	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
3	chr14:68123800-68139400	Weak transcription	Fetal Brain Male	brain
4	chr14:68124000-68136400	Weak transcription	Pancreas	Pancrea
5	chr14:68124000-68139600	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
6	chr14:68124000-68140200	Weak transcription	iPS-20b Cell Line	embryonic stem cell
7	chr14:68124000-68140200	Weak transcription	Right Ventricle	heart
8	chr14:68124200-68139400	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
9	chr14:68124400-68136600	Weak transcription	Gastric	stomach
10	chr14:68124400-68138000	Weak transcription	Ovary	ovary
11	chr14:68124400-68139400	Weak transcription	Aorta	Aorta
12	chr14:68124400-68139400	Weak transcription	Placenta Amnion	Placenta Amnion
13	chr14:68124400-68139400	Weak transcription	Spleen	Spleen
14	chr14:68124400-68139600	Weak transcription	Colonic Mucosa	Colon
15	chr14:68124400-68140400	Weak transcription	H9 Cell Line	embryonic stem cell
16	chr14:68124400-68140800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
17	chr14:68124800-68138400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
18	chr14:68124800-68139200	Weak transcription	Lung	lung
19	chr14:68125000-68139600	Weak transcription	HUVEC	blood vessel
20	chr14:68125800-68138400	Weak transcription	Skeletal Muscle Male	skeletal muscle
21	chr14:68125800-68140200	Weak transcription	H1 Cell Line	embryonic stem cell
22	chr14:68126000-68139400	Weak transcription	Fetal Brain Female	brain
23	chr14:68126600-68139400	Weak transcription	Fetal Lung	lung
24	chr14:68126600-68139400	Weak transcription	Hela-S3	cervix
25	chr14:68126600-68140000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
26	chr14:68126800-68139600	Weak transcription	iPS-18 Cell Line	embryonic stem cell
27	chr14:68126800-68140400	Weak transcription	HUES6 Cell Line	embryonic stem cell
28	chr14:68127000-68138600	Weak transcription	HepG2	liver
29	chr14:68127000-68139400	Weak transcription	NH-A	brain
30	chr14:68127200-68139400	Weak transcription	Rectal Mucosa Donor 31	rectum
31	chr14:68127200-68139400	Weak transcription	HSMMtube	muscle
32	chr14:68127400-68139600	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
33	chr14:68127600-68138400	Weak transcription	Esophagus	oesophagus
34	chr14:68127800-68139400	Weak transcription	Rectal Mucosa Donor 29	rectum
35	chr14:68127800-68140200	Weak transcription	A549	lung
36	chr14:68128200-68138800	Weak transcription	Left Ventricle	heart
37	chr14:68128600-68140000	Weak transcription	Fetal Muscle Trunk	muscle
38	chr14:68128800-68139400	Weak transcription	Sigmoid Colon	Sigmoid Colon
39	chr14:68129400-68139400	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
40	chr14:68129400-68139400	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
41	chr14:68129600-68139800	Weak transcription	Placenta	Placenta
42	chr14:68130000-68139400	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
43	chr14:68130000-68139600	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
44	chr14:68132200-68139400	Weak transcription	Fetal Stomach	stomach
45	chr14:68133000-68136600	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
46	chr14:68133000-68139400	Weak transcription	HMEC	breast
47	chr14:68133000-68140200	Weak transcription	HSMM	muscle
48	chr14:68133200-68139400	Weak transcription	NHEK	skin
49	chr14:68133600-68136400	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
50	chr14:68133800-68139000	Weak transcription	Primary neutrophils fromperipheralblood	blood

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