Variant report

Variant	rs2095806
Chromosome Location	chr14:70956931-70956932
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 38 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:35)

rs_ID	r²[population]
rs10151236	1.00[EUR][1000 genomes]
rs11621219	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12434063	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2332376	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2332383	1.00[EUR][1000 genomes]
rs2332385	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2332386	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs55865251	1.00[EUR][1000 genomes]
rs56698163	1.00[EUR][1000 genomes]
rs57082239	1.00[EUR][1000 genomes]
rs57486211	1.00[EUR][1000 genomes]
rs57957300	1.00[EUR][1000 genomes]
rs58669540	1.00[EUR][1000 genomes]
rs59242599	1.00[EUR][1000 genomes]
rs59853961	1.00[EUR][1000 genomes]
rs60598858	1.00[EUR][1000 genomes]
rs7144255	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7144371	1.00[AMR][1000 genomes]
rs7148128	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7160707	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73282125	1.00[EUR][1000 genomes]
rs73282130	1.00[EUR][1000 genomes]
rs73282131	1.00[EUR][1000 genomes]
rs73282190	1.00[EUR][1000 genomes]
rs73282196	1.00[EUR][1000 genomes]
rs73283923	1.00[EUR][1000 genomes]
rs73283934	1.00[EUR][1000 genomes]
rs73283937	1.00[EUR][1000 genomes]
rs73283977	1.00[EUR][1000 genomes]
rs73283980	1.00[EUR][1000 genomes]
rs73283997	1.00[EUR][1000 genomes]
rs8013510	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs8015825	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs8016729	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs8020995	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv565042	chr14:70951234-71011734	Weak transcription ZNF genes & repeats Strong transcription Enhancers Genic enhancers Active TSS Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
2	nsv1050615	chr14:70954149-71013235	Weak transcription ZNF genes & repeats Strong transcription Enhancers Transcr. at gene 5' and 3' Active TSS Genic enhancers Flanking Active TSS	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
3	esv2763072	chr14:70954149-71013247	Strong transcription ZNF genes & repeats Weak transcription Enhancers Transcr. at gene 5' and 3' Active TSS Genic enhancers Flanking Active TSS	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:29 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:70951400-70957600	Weak transcription	Skeletal Muscle Female	skeletal muscle
2	chr14:70954400-70957400	Weak transcription	Primary T helper naive cells from peripheral blood	blood
3	chr14:70954800-70958600	ZNF genes & repeats	Lung	lung
4	chr14:70954800-70958800	ZNF genes & repeats	Breast Myoepithelial Primary Cells	Breast
5	chr14:70955000-70957800	Weak transcription	HSMMtube	muscle
6	chr14:70955000-70958600	ZNF genes & repeats	Aorta	Aorta
7	chr14:70955000-70959200	ZNF genes & repeats	Adipose Nuclei	Adipose
8	chr14:70955400-70959200	ZNF genes & repeats	Duodenum Smooth Muscle	Duodenum
9	chr14:70955600-70957200	Strong transcription	Stomach Smooth Muscle	stomach
10	chr14:70955600-70965600	Weak transcription	Right Ventricle	heart
11	chr14:70955800-70957000	ZNF genes & repeats	Pancreatic Islets	Pancreatic Islet
12	chr14:70955800-70958600	ZNF genes & repeats	Ovary	ovary
13	chr14:70955800-70958800	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
14	chr14:70955800-70959200	ZNF genes & repeats	Primary T helper cells fromperipheralblood	blood
15	chr14:70956000-70957000	ZNF genes & repeats	iPS-20b Cell Line	embryonic stem cell
16	chr14:70956000-70958600	ZNF genes & repeats	Brain Inferior Temporal Lobe	brain
17	chr14:70956000-70959200	ZNF genes & repeats	Primary T helper cells PMA-I stimulated	--
18	chr14:70956200-70957000	ZNF genes & repeats	ES-UCSF4 Cell Line	embryonic stem cell
19	chr14:70956200-70957400	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
20	chr14:70956200-70958600	ZNF genes & repeats	Primary B cells from peripheral blood	blood
21	chr14:70956200-70958600	ZNF genes & repeats	Brain Anterior Caudate	brain
22	chr14:70956400-70957200	ZNF genes & repeats	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
23	chr14:70956400-70958400	ZNF genes & repeats	H1 Cell Line	embryonic stem cell
24	chr14:70956400-70958600	ZNF genes & repeats	Primary T cells effector/memory enriched fromperipheralblood	blood
25	chr14:70956600-70957200	Weak transcription	Brain Cingulate Gyrus	brain
26	chr14:70956600-70958000	Weak transcription	Skeletal Muscle Male	skeletal muscle
27	chr14:70956600-70966600	Weak transcription	Left Ventricle	heart
28	chr14:70956800-70958800	ZNF genes & repeats	Liver	Liver
29	chr14:70956800-70961800	Weak transcription	Placenta Amnion	Placenta Amnion

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