Variant report

Variant	rs8020995
Chromosome Location	chr14:70908190-70908191
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 38 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:36)

rs_ID	r²[population]
rs10151236	0.95[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs11621219	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs12434063	0.90[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs2095806	1.00[EUR][1000 genomes]
rs2332376	1.00[EUR][1000 genomes]
rs2332383	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs2332385	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs2332386	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs55865251	1.00[EUR][1000 genomes]
rs56698163	1.00[EUR][1000 genomes]
rs57082239	1.00[EUR][1000 genomes]
rs57486211	1.00[EUR][1000 genomes]
rs57957300	1.00[EUR][1000 genomes]
rs58669540	1.00[EUR][1000 genomes]
rs59242599	1.00[EUR][1000 genomes]
rs59853961	1.00[EUR][1000 genomes]
rs60598858	1.00[EUR][1000 genomes]
rs7144255	0.85[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs7144371	0.85[AFR][1000 genomes]
rs7148128	0.90[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs7160707	0.85[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs73282125	1.00[EUR][1000 genomes]
rs73282130	1.00[EUR][1000 genomes]
rs73282131	1.00[EUR][1000 genomes]
rs73282190	1.00[EUR][1000 genomes]
rs73282196	1.00[EUR][1000 genomes]
rs73283923	1.00[EUR][1000 genomes]
rs73283934	1.00[EUR][1000 genomes]
rs73283937	1.00[EUR][1000 genomes]
rs73283977	1.00[EUR][1000 genomes]
rs73283980	1.00[EUR][1000 genomes]
rs73283997	1.00[EUR][1000 genomes]
rs8007103	0.97[AFR][1000 genomes]
rs8013510	0.87[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs8015825	0.85[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs8016729	0.90[AFR][1000 genomes];1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv902075	chr14:70612618-70919016	Enhancers Strong transcription Weak transcription Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS Active TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	15 gene(s)	inside rSNPs	diseases
2	esv3431215	chr14:70903367-70909828	ZNF genes & repeats Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:70907200-70908800	Weak transcription	Left Ventricle	heart

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links