Variant report

Variant	rs210547
Chromosome Location	chrX:104889438-104889439
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 32 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:32)

rs_ID	r²[population]
rs1156923	1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[YRI][hapmap]
rs1292802	1.00[YRI][hapmap]
rs16984799	0.87[CHD][hapmap]
rs16984800	0.87[CHD][hapmap]
rs17343011	0.84[CHB][hapmap];0.85[CHD][hapmap];0.83[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[YRI][hapmap]
rs17343018	0.84[CHB][hapmap];0.85[CHD][hapmap];0.83[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[YRI][hapmap]
rs210427	1.00[JPT][hapmap]
rs210428	0.86[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap]
rs210430	0.86[CHB][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[YRI][hapmap]
rs210433	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[MKK][hapmap];1.00[YRI][hapmap]
rs210435	0.84[CHB][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[YRI][hapmap]
rs210437	0.84[CHB][hapmap];1.00[JPT][hapmap]
rs210544	1.00[JPT][hapmap]
rs210545	1.00[JPT][hapmap]
rs210548	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap]
rs210549	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[YRI][hapmap]
rs210554	0.86[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap]
rs210556	1.00[JPT][hapmap]
rs210726	0.84[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap]
rs210729	0.84[CHB][hapmap];0.87[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[YRI][hapmap]
rs210730	1.00[YRI][hapmap]
rs210731	1.00[JPT][hapmap];1.00[YRI][hapmap]
rs210734	0.84[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap]
rs2213338	0.87[CHD][hapmap]
rs400761	1.00[CHB][hapmap];1.00[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[YRI][hapmap]
rs440424	1.00[JPT][hapmap]
rs448592	1.00[CHB][hapmap];1.00[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[YRI][hapmap]
rs482764	0.86[CHB][hapmap];0.87[CHD][hapmap];1.00[JPT][hapmap]
rs5916928	0.84[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap]
rs5916929	1.00[JPT][hapmap];1.00[YRI][hapmap]
rs5962536	0.87[CHD][hapmap]
rs6621983	1.00[JPT][hapmap]

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chrX:104887800-104890800	Weak transcription	Psoas Muscle	Psoas
2	chrX:104889000-104889800	Enhancers	Fetal Adrenal Gland	Adrenal Gland
3	chrX:104889200-104890200	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
4	chrX:104889400-104890400	Enhancers	NHEK	skin
5	chrX:104889400-104890800	Enhancers	HMEC	breast
6	chrX:104889400-104891800	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin

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