Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr13:67414851..67415422-chr7:70812042..70812870,2	MCF-7	breast:

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs10267677	0.89[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs11760742	0.87[AMR][1000 genomes];0.91[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11768233	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11770205	0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11771662	0.85[AMR][1000 genomes];0.89[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs13240200	0.88[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17628870	0.83[EUR][1000 genomes]
rs2527286	0.89[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs2527300	0.82[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs2527313	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2707425	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2707433	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2707438	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34445434	0.80[EUR][1000 genomes]
rs34822312	0.85[AMR][1000 genomes];0.88[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs35964468	0.83[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs4719115	0.87[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs6952259	0.84[ASN][1000 genomes]
rs6972973	0.86[AMR][1000 genomes];0.91[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7803720	0.89[AMR][1000 genomes];0.95[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv519090	chr7:70085934-71071896	Weak transcription Enhancers Bivalent/Poised TSS Active TSS Strong transcription ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	6 gene(s)	inside rSNPs	diseases
2	nsv1015261	chr7:70404302-71255933	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Strong transcription Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:19 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:70805000-70813800	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
2	chr7:70805200-70813400	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
3	chr7:70805600-70813200	Weak transcription	H9 Cell Line	embryonic stem cell
4	chr7:70805600-70813200	Weak transcription	iPS-18 Cell Line	embryonic stem cell
5	chr7:70808200-70813400	Weak transcription	HUES48 Cell Line	embryonic stem cell
6	chr7:70808600-70813800	Weak transcription	Fetal Brain Male	brain
7	chr7:70809400-70813200	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
8	chr7:70810600-70813800	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
9	chr7:70810600-70813800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
10	chr7:70810800-70813600	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
11	chr7:70811600-70812800	Weak transcription	HUES6 Cell Line	embryonic stem cell
12	chr7:70812400-70815400	Enhancers	HUES64 Cell Line	embryonic stem cell
13	chr7:70812600-70812800	Enhancers	H1 Cell Line	embryonic stem cell
14	chr7:70812600-70812800	Enhancers	Fetal Muscle Leg	muscle
15	chr7:70812600-70812800	Enhancers	Pancreas	Pancrea
16	chr7:70812600-70814200	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
17	chr7:70812600-70814600	Enhancers	iPS-20b Cell Line	embryonic stem cell
18	chr7:70812600-70814600	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
19	chr7:70812600-70814800	Enhancers	ES-I3 Cell Line	embryonic stem cell

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