Variant report

rSNPs within LD-proxies of this variant (count:29)

rs_ID	r²[population]
rs11897011	1.00[ASN][1000 genomes]
rs1207413	1.00[ASN][1000 genomes]
rs13389747	1.00[ASN][1000 genomes]
rs13409214	1.00[ASN][1000 genomes]
rs13409417	1.00[ASN][1000 genomes]
rs16837235	1.00[ASN][1000 genomes]
rs2001527	1.00[ASN][1000 genomes]
rs2668143	0.87[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs28582277	1.00[ASN][1000 genomes]
rs59617257	1.00[ASN][1000 genomes]
rs59629925	1.00[ASN][1000 genomes]
rs6745571	1.00[ASN][1000 genomes]
rs6760161	1.00[ASN][1000 genomes]
rs73055947	1.00[ASN][1000 genomes]
rs73055953	1.00[ASN][1000 genomes]
rs73058323	1.00[ASN][1000 genomes]
rs7591617	1.00[ASN][1000 genomes]
rs849192	1.00[ASN][1000 genomes]
rs849196	0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs849197	0.84[EUR][1000 genomes]
rs849199	0.88[AFR][1000 genomes];0.83[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs849204	0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs849205	0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs849212	0.89[AFR][1000 genomes];0.83[AMR][1000 genomes];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs849213	1.00[ASN][1000 genomes]
rs849268	1.00[ASN][1000 genomes]
rs861066	1.00[ASN][1000 genomes]
rs964355	0.87[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs964356	0.90[AMR][1000 genomes];0.98[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1012780	chr2:206124954-206546271	Enhancers Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Active TSS Flanking Active TSS Strong transcription ZNF genes & repeats Bivalent/Poised TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
2	nsv962519	chr2:206239854-206250466	Enhancers Flanking Active TSS Weak transcription Active TSS	Chromatin interactive region	n/a	inside rSNPs	n/a
3	nsv584244	chr2:206247450-206378392	Weak transcription Enhancers Flanking Active TSS Active TSS Strong transcription Bivalent Enhancer Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:206247200-206248600	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived

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