Variant report

rSNPs within LD-proxies of this variant (count:27)

rs_ID	r²[population]
rs1467690	0.95[AFR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs167832	0.81[EUR][1000 genomes]
rs167834	0.81[EUR][1000 genomes]
rs191266	0.90[EUR][1000 genomes]
rs1927839	0.81[EUR][1000 genomes]
rs2475513	0.90[EUR][1000 genomes]
rs2475516	0.90[EUR][1000 genomes]
rs2475517	0.90[EUR][1000 genomes]
rs2475522	0.90[EUR][1000 genomes]
rs2475527	0.82[AFR][1000 genomes];0.90[EUR][1000 genomes]
rs2475528	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2475535	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2479777	0.90[EUR][1000 genomes]
rs2479780	0.90[EUR][1000 genomes]
rs2479783	0.90[EUR][1000 genomes]
rs2479788	0.82[AFR][1000 genomes];0.90[EUR][1000 genomes]
rs2479797	0.83[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs326504	0.90[EUR][1000 genomes]
rs326521	0.90[EUR][1000 genomes]
rs4325394	1.00[EUR][1000 genomes]
rs4769001	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4769679	1.00[EUR][1000 genomes]
rs6490353	0.93[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs6490354	0.90[EUR][1000 genomes]
rs7330567	0.93[AFR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9506090	0.90[EUR][1000 genomes]
rs9508258	0.90[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv533835	chr13:29141132-29962069	Weak transcription Strong transcription Flanking Active TSS Bivalent/Poised TSS Enhancers Genic enhancers Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	28 gene(s)	inside rSNPs	diseases
2	esv3406145	chr13:29616606-29917459	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Bivalent Enhancer Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:29665400-29672400	Weak transcription	Fetal Heart	heart
2	chr13:29667600-29668600	Weak transcription	Liver	Liver

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