Variant report

Variant	rs2167618
Chromosome Location	chr3:56312140-56312141
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:8)

rs_ID	r²[population]
rs11706502	0.87[AFR][1000 genomes]
rs11716710	0.86[AFR][1000 genomes]
rs35958142	0.82[AFR][1000 genomes]
rs4585165	0.95[AFR][1000 genomes];0.89[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs62253588	0.83[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs6762680	1.00[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7619653	0.86[AFR][1000 genomes]
rs7639248	0.82[AFR][1000 genomes]

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:56306000-56319200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
2	chr3:56310600-56312200	Enhancers	iPS-18 Cell Line	embryonic stem cell
3	chr3:56311000-56312200	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
4	chr3:56311400-56312200	Enhancers	ES-WA7 Cell Line	embryonic stem cell
5	chr3:56311400-56312200	Enhancers	HUES64 Cell Line	embryonic stem cell
6	chr3:56311600-56317000	Weak transcription	H9 Cell Line	embryonic stem cell
7	chr3:56311600-56317000	Weak transcription	HUES48 Cell Line	embryonic stem cell

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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