Variant report

Variant	rs7639248
Chromosome Location	chr3:56360594-56360595
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 48 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:48)

rs_ID	r²[population]
rs11130508	0.89[EUR][1000 genomes]
rs11130509	0.89[EUR][1000 genomes]
rs11130516	0.84[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs11706502	0.94[AFR][1000 genomes];0.83[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs11708654	0.85[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs11714882	0.84[AFR][1000 genomes];0.88[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs11715774	0.82[AFR][1000 genomes];0.88[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs11716710	0.95[AFR][1000 genomes];0.86[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs13076397	0.89[EUR][1000 genomes]
rs13085545	0.89[EUR][1000 genomes]
rs13096861	0.89[EUR][1000 genomes]
rs1349615	0.87[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs17825379	0.89[EUR][1000 genomes]
rs17825409	0.85[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs17825415	0.85[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs17825421	0.85[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs1869156	0.82[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1947348	0.86[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs2123183	0.87[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs2167618	0.82[AFR][1000 genomes]
rs2873303	0.82[AFR][1000 genomes];0.88[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs34407400	0.85[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs34502592	0.82[EUR][1000 genomes]
rs34699897	0.82[EUR][1000 genomes]
rs34715192	0.82[EUR][1000 genomes]
rs34718158	0.89[EUR][1000 genomes]
rs34750355	0.83[AFR][1000 genomes];0.91[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs35958142	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4325896	0.88[EUR][1000 genomes]
rs4585165	0.80[AFR][1000 genomes]
rs4974133	0.85[AFR][1000 genomes];0.88[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs56229179	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs62253617	0.89[EUR][1000 genomes]
rs62255862	0.85[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs62255863	0.85[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs6762680	0.82[AFR][1000 genomes]
rs6777792	0.89[AFR][1000 genomes];0.92[AMR][1000 genomes];0.85[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs6781931	0.89[AFR][1000 genomes];0.92[AMR][1000 genomes];0.85[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs6784908	0.89[AFR][1000 genomes];0.92[AMR][1000 genomes];0.85[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs6793746	0.91[AMR][1000 genomes];0.85[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs6797275	0.89[AFR][1000 genomes];0.92[AMR][1000 genomes];0.85[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs73086420	0.82[AFR][1000 genomes];0.92[EUR][1000 genomes]
rs7619653	0.95[AFR][1000 genomes];0.84[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs7638645	0.89[AFR][1000 genomes];0.92[AMR][1000 genomes];0.85[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7641043	0.87[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs7641157	0.86[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs7641435	0.86[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs766695	0.91[AMR][1000 genomes];0.84[EUR][1000 genomes];0.98[ASN][1000 genomes]

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:56358600-56364400	Weak transcription	HUES48 Cell Line	embryonic stem cell
2	chr3:56358800-56361600	Weak transcription	Right Atrium	heart
3	chr3:56359000-56363400	Weak transcription	Fetal Heart	heart

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