Variant report

Variant	rs6762680
Chromosome Location	chr3:56313156-56313157
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 8 )
Associated
traits (count: 1 )

rSNPs within LD-proxies of this variant (count:8)

rs_ID	r²[population]
rs11706502	0.87[AFR][1000 genomes]
rs11716710	0.86[AFR][1000 genomes]
rs2167618	1.00[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs35958142	0.82[AFR][1000 genomes]
rs4585165	0.95[AFR][1000 genomes];0.90[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs62253588	0.82[EUR][1000 genomes]
rs7619653	0.86[AFR][1000 genomes]
rs7639248	0.82[AFR][1000 genomes]

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs6762680	ERC2	cis	cerebellum	SCAN

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:56306000-56319200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
2	chr3:56311600-56317000	Weak transcription	H9 Cell Line	embryonic stem cell
3	chr3:56311600-56317000	Weak transcription	HUES48 Cell Line	embryonic stem cell
4	chr3:56312200-56318400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
5	chr3:56312200-56319400	Weak transcription	ES-WA7 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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