Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr21:15814489..15816453-chr21:15820620..15823655,3	K562	blood:

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs11088043	0.96[EUR][1000 genomes]
rs12482199	0.89[AMR][1000 genomes];0.95[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs12483041	1.00[LWK][hapmap];1.00[MKK][hapmap];0.90[TSI][hapmap];1.00[AFR][1000 genomes]
rs12626304	1.00[AFR][1000 genomes];0.90[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs17208186	1.00[CHB][hapmap];1.00[LWK][hapmap];0.87[MKK][hapmap]
rs2142235	0.96[EUR][1000 genomes]
rs2822761	1.00[LWK][hapmap]
rs2822776	1.00[LWK][hapmap]
rs62229703	1.00[AFR][1000 genomes]
rs62229728	1.00[AFR][1000 genomes];0.90[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs62229729	1.00[AFR][1000 genomes];0.90[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs62229747	0.83[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs62229750	0.83[AMR][1000 genomes]
rs62229751	0.83[AMR][1000 genomes]
rs73171326	0.94[AMR][1000 genomes];0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs760348	1.00[LWK][hapmap]
rs8127371	1.00[JPT][hapmap]
rs8134274	0.96[EUR][1000 genomes]
rs9636579	0.83[AMR][1000 genomes]
rs9636800	0.83[AMR][1000 genomes]
rs9975245	0.96[EUR][1000 genomes]
rs9975290	0.96[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1063703	chr21:15777995-15882121	Enhancers Strong transcription Weak transcription Flanking Active TSS Genic enhancers ZNF genes & repeats Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
2	nsv544375	chr21:15777995-15882121	Enhancers Strong transcription Weak transcription Genic enhancers Flanking Active TSS Active TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
3	nsv966029	chr21:15818808-15833739	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr21:15819000-15822400	Weak transcription	K562	blood

Quick Search: