Variant report

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	POLR2A	chr10:49957102-49957875	GM12878	blood:	n/a	n/a

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:49948156..49950641-chr10:49956258..49957956,2	K562	blood:

Variant related genes	Relation type
ENSG00000228754	TF binding region

rSNPs within LD-proxies of this variant (count:30)

rs_ID	r²[population]
rs10857636	1.00[CEU][hapmap]
rs10857637	1.00[CEU][hapmap]
rs10857638	1.00[CEU][hapmap]
rs10857648	1.00[CEU][hapmap]
rs10857649	1.00[CEU][hapmap]
rs11101447	1.00[CEU][hapmap];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs11101454	0.94[EUR][1000 genomes]
rs11101458	1.00[CEU][hapmap];0.87[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11101461	1.00[CEU][hapmap];0.87[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11101463	1.00[CEU][hapmap]
rs11101475	1.00[CEU][hapmap]
rs11101505	1.00[CEU][hapmap]
rs11816499	1.00[CEU][hapmap]
rs12257841	1.00[CEU][hapmap]
rs12769821	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs12775006	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs12784705	0.93[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs17011160	1.00[CEU][hapmap]
rs17698900	1.00[CEU][hapmap];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs1871604	1.00[CEU][hapmap]
rs2683611	1.00[CEU][hapmap]
rs2889689	1.00[EUR][1000 genomes]
rs2940706	1.00[CEU][hapmap]
rs34584605	1.00[EUR][1000 genomes]
rs67702314	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7075745	1.00[CEU][hapmap]
rs7087831	1.00[CEU][hapmap];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs7912986	1.00[YRI][hapmap]
rs7914884	1.00[CEU][hapmap];0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7919695	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv895371	chr10:49492075-50232180	Weak transcription Active TSS Bivalent Enhancer Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	35 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:17 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:49923400-49960200	Strong transcription	Primary hematopoietic stem cells short term culture	blood
2	chr10:49952000-49960800	Strong transcription	Primary neutrophils fromperipheralblood	blood
3	chr10:49953400-49960200	ZNF genes & repeats	Primary hematopoietic stem cells G-CSF-mobilized Male	--
4	chr10:49955000-49958000	Strong transcription	Primary hematopoietic stem cells	blood
5	chr10:49956200-49957800	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
6	chr10:49956200-49958600	Enhancers	Adipose Nuclei	Adipose
7	chr10:49957000-49959000	Enhancers	Skeletal Muscle Male	skeletal muscle
8	chr10:49957000-49961200	Strong transcription	Primary B cells from cord blood	blood
9	chr10:49957000-49962000	Strong transcription	Monocytes-CD14+_RO01746	blood
10	chr10:49957200-49959000	Strong transcription	Primary B cells from peripheral blood	blood
11	chr10:49957400-49958600	Enhancers	Lung	lung
12	chr10:49957400-49958600	Genic enhancers	Spleen	Spleen
13	chr10:49957400-49959000	Enhancers	Left Ventricle	heart
14	chr10:49957400-49960200	Strong transcription	Primary monocytes fromperipheralblood	blood
15	chr10:49957600-49959600	Enhancers	Right Ventricle	heart
16	chr10:49957600-49960200	Strong transcription	Primary mononuclear cells fromperipheralblood	Blood
17	chr10:49957600-49963400	Strong transcription	GM12878-XiMat	blood

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