Variant report
| Variant | rs2214084 |
|---|---|
| Chromosome Location | chr7:104025944-104025945 |
| allele | C/T |
| Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
| rs_ID | r2[population] |
|---|---|
| rs10249235 | 0.96[YRI][hapmap] |
| rs10953427 | 1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap] |
| rs10953428 | 0.96[YRI][hapmap] |
| rs1123760 | 0.96[CHB][hapmap];0.95[JPT][hapmap] |
| rs11972919 | 0.94[AMR][1000 genomes];0.83[ASN][1000 genomes] |
| rs12216592 | 1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap] |
| rs1468143 | 1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[YRI][hapmap] |
| rs1468144 | 0.96[YRI][hapmap] |
| rs17390895 | 0.96[YRI][hapmap] |
| rs2097667 | 0.81[JPT][hapmap] |
| rs2188482 | 0.96[YRI][hapmap] |
| rs2188494 | 0.91[YRI][hapmap] |
| rs2214086 | 0.96[YRI][hapmap] |
| rs2214087 | 1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap] |
| rs4236567 | 0.96[YRI][hapmap];0.81[AMR][1000 genomes] |
| rs4236568 | 0.80[ASN][1000 genomes] |
| rs4727596 | 0.84[YRI][hapmap] |
| rs4730002 | 0.96[YRI][hapmap];0.82[AMR][1000 genomes] |
| rs7778325 | 0.96[YRI][hapmap] |
| rs7790817 | 1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap] |
| rs7798273 | 0.83[YRI][hapmap] |
Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page:
1
| No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
|---|---|---|---|---|---|---|---|
| 1 | nsv608067 | chr7:103944237-104029408 | Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers Bivalent Enhancer Bivalent/Poised TSS Weak transcription | TF binding regionCpG islandChromatin interactive region | 2 gene(s) | inside rSNPs | diseases |
| No data |





