Variant report
| Variant | rs7790817 |
|---|---|
| Chromosome Location | chr7:104030578-104030579 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:1)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
(count:1 , 50 per page) page:
1
| No. | Distal block | Cell Line | Cell type | Cell Stage |
|---|---|---|---|---|
| 1 | chr7:104028797..104030802-chr7:104033440..104036374,2 | K562 | blood: |
| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:21)
| rs_ID | r2[population] |
|---|---|
| rs10249235 | 0.95[YRI][hapmap] |
| rs10953427 | 1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap] |
| rs10953428 | 0.95[YRI][hapmap] |
| rs1123760 | 0.95[CHB][hapmap];0.94[JPT][hapmap] |
| rs11972919 | 0.97[AMR][1000 genomes];0.85[ASN][1000 genomes] |
| rs12216592 | 1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap] |
| rs1468143 | 1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[YRI][hapmap] |
| rs1468144 | 0.95[YRI][hapmap] |
| rs17390895 | 0.95[YRI][hapmap] |
| rs2097667 | 0.88[JPT][hapmap] |
| rs2188482 | 0.95[YRI][hapmap] |
| rs2188494 | 0.91[YRI][hapmap] |
| rs2214084 | 1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap] |
| rs2214086 | 0.95[YRI][hapmap] |
| rs2214087 | 1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap] |
| rs4236567 | 0.95[YRI][hapmap] |
| rs4236568 | 0.82[ASN][1000 genomes] |
| rs4727596 | 0.94[YRI][hapmap] |
| rs4730002 | 0.95[YRI][hapmap] |
| rs7778325 | 0.95[YRI][hapmap] |
| rs7798273 | 0.86[YRI][hapmap] |
| No data |
Chromatin state (count:0 , 50 per page) page:
| No data |
