Variant report

Variant rs2230649
Chromosome Location chr11:57102096-57102097
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:57093200-57102800 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr11:57100400-57102200 Transcr. at gene 5' and 3' GM12878-XiMat blood
3 chr11:57100400-57102400 Weak transcription Primary neutrophils fromperipheralblood blood
4 chr11:57100600-57102200 Weak transcription HSMM muscle
5 chr11:57100600-57102400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
6 chr11:57100600-57102400 Weak transcription Placenta Amnion Placenta Amnion
7 chr11:57100600-57102600 Weak transcription Ovary ovary
8 chr11:57100800-57102400 Enhancers Primary T helper naive cells fromperipheralblood blood
9 chr11:57100800-57102400 Weak transcription Pancreas Pancrea
10 chr11:57101000-57102200 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin01 Skin
11 chr11:57101000-57102200 Transcr. at gene 5' and 3' Hela-S3 cervix
12 chr11:57101000-57102600 Weak transcription Aorta Aorta
13 chr11:57101200-57102400 Weak transcription Esophagus oesophagus
14 chr11:57101400-57102200 Genic enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
15 chr11:57101400-57102200 Enhancers Primary hematopoietic stem cells blood
16 chr11:57101400-57102200 Enhancers Primary T helper cells fromperipheralblood blood
17 chr11:57101400-57102200 Genic enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
18 chr11:57101400-57102200 Transcr. at gene 5' and 3' Foreskin Keratinocyte Primary Cells skin02 Skin
19 chr11:57101400-57102200 Active TSS Colonic Mucosa Colon
20 chr11:57101400-57102400 Enhancers Primary T helper memory cells from peripheral blood 1 blood
21 chr11:57101400-57102400 Enhancers Primary Natural Killer cells fromperipheralblood blood
22 chr11:57101400-57102400 Enhancers Primary T killer naive cells fromperipheralblood blood
23 chr11:57101400-57102400 Genic enhancers Fetal Intestine Small intestine
24 chr11:57101600-57102200 Weak transcription ES-I3 Cell Line embryonic stem cell
25 chr11:57101600-57102200 Enhancers Primary T killer memory cells from peripheral blood blood
26 chr11:57101600-57102200 Genic enhancers Cortex derived primary cultured neurospheres brain
27 chr11:57101600-57102200 Genic enhancers Fetal Muscle Leg muscle
28 chr11:57101600-57102200 Enhancers Sigmoid Colon Sigmoid Colon
29 chr11:57101600-57102200 Enhancers Thymus Thymus
30 chr11:57101600-57102400 Transcr. at gene 5' and 3' H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
31 chr11:57101600-57102400 Enhancers Fetal Heart heart
32 chr11:57101600-57102600 Transcr. at gene 5' and 3' Primary T cells from cord blood blood
33 chr11:57101600-57102600 Enhancers Primary mononuclear cells fromperipheralblood Blood
34 chr11:57101600-57102800 Transcr. at gene 5' and 3' A549 lung
35 chr11:57101600-57102800 Transcr. at gene 5' and 3' Dnd41 blood
36 chr11:57101800-57102200 Transcr. at gene 5' and 3' HUES6 Cell Line embryonic stem cell
37 chr11:57101800-57102200 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
38 chr11:57101800-57102200 Transcr. at gene 5' and 3' Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
39 chr11:57101800-57102200 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin02 Skin
40 chr11:57101800-57102200 Enhancers Brain Angular Gyrus brain
41 chr11:57101800-57102200 Enhancers Brain Inferior Temporal Lobe brain
42 chr11:57101800-57102200 Enhancers Duodenum Smooth Muscle Duodenum
43 chr11:57101800-57102200 Genic enhancers Fetal Adrenal Gland Adrenal Gland
44 chr11:57101800-57102200 Transcr. at gene 5' and 3' Fetal Lung lung
45 chr11:57101800-57102200 Transcr. at gene 5' and 3' HepG2 liver
46 chr11:57101800-57102200 Enhancers Monocytes-CD14+_RO01746 blood
47 chr11:57101800-57102400 Flanking Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
48 chr11:57101800-57102400 Genic enhancers IMR90 fetal lung fibroblasts Cell Line lung
49 chr11:57101800-57102400 Enhancers Primary T cells fromperipheralblood blood
50 chr11:57101800-57102400 Enhancers Brain Substantia Nigra brain

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