Variant report

Variant rs10896598
Chromosome Location chr11:57052007-57052008
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:47 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:57045800-57054200 Weak transcription Sigmoid Colon Sigmoid Colon
2 chr11:57046000-57062000 Weak transcription Right Atrium heart
3 chr11:57046600-57056000 Weak transcription Adipose Nuclei Adipose
4 chr11:57048200-57055200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
5 chr11:57048200-57055600 Weak transcription Muscle Satellite Cultured Cells --
6 chr11:57048200-57056400 Weak transcription Gastric stomach
7 chr11:57050200-57053800 Enhancers Placenta Placenta
8 chr11:57050400-57052200 Enhancers iPS-20b Cell Line embryonic stem cell
9 chr11:57050400-57052400 Enhancers ES-WA7 Cell Line embryonic stem cell
10 chr11:57050400-57052400 Enhancers H9 Cell Line embryonic stem cell
11 chr11:57050400-57052600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
12 chr11:57050600-57052200 Enhancers Breast Myoepithelial Primary Cells Breast
13 chr11:57050800-57052400 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
14 chr11:57051000-57052200 Enhancers HSMMtube muscle
15 chr11:57051000-57052400 Enhancers H1 Cell Line embryonic stem cell
16 chr11:57051200-57052400 Enhancers Fetal Intestine Large intestine
17 chr11:57051400-57052800 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
18 chr11:57051400-57055000 Weak transcription HMEC breast
19 chr11:57051400-57055200 Weak transcription NHEK skin
20 chr11:57051400-57055800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
21 chr11:57051400-57056200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
22 chr11:57051600-57052200 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
23 chr11:57051600-57052400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
24 chr11:57051600-57054200 Weak transcription Rectal Mucosa Donor 31 rectum
25 chr11:57051600-57055600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
26 chr11:57051600-57055600 Weak transcription HSMM muscle
27 chr11:57051600-57056200 Weak transcription Stomach Mucosa stomach
28 chr11:57051600-57056600 Weak transcription Rectal Mucosa Donor 29 rectum
29 chr11:57051800-57052200 Enhancers iPS-15b Cell Line embryonic stem cell
30 chr11:57051800-57052200 Weak transcription Osteobl bone
31 chr11:57051800-57052400 Enhancers HUES6 Cell Line embryonic stem cell
32 chr11:57051800-57054400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
33 chr11:57051800-57055400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
34 chr11:57051800-57055600 Weak transcription NHDF-Ad bronchial
35 chr11:57051800-57055800 Weak transcription Small Intestine intestine
36 chr11:57051800-57056200 Weak transcription HUES48 Cell Line embryonic stem cell
37 chr11:57051800-57056400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
38 chr11:57051800-57056400 Weak transcription Esophagus oesophagus
39 chr11:57051800-57062000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
40 chr11:57052000-57052400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
41 chr11:57052000-57055800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
42 chr11:57052000-57055800 Weak transcription Duodenum Mucosa Duodenum
43 chr11:57052000-57056000 Weak transcription Fetal Intestine Small intestine
44 chr11:57052000-57056200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
45 chr11:57052000-57056200 Weak transcription iPS-18 Cell Line embryonic stem cell
46 chr11:57052000-57056400 Weak transcription ES-I3 Cell Line embryonic stem cell
47 chr11:57052000-57056600 Weak transcription HUES64 Cell Line embryonic stem cell

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