Variant report

Variant	rs2248249
Chromosome Location	chr1:225050288-225050289
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs10915723	0.82[EUR][1000 genomes]
rs10915725	0.87[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs12120196	0.86[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs2405782	0.95[EUR][1000 genomes]
rs2800230	0.86[EUR][1000 genomes]
rs2800235	0.80[AMR][1000 genomes]
rs2800236	0.80[AMR][1000 genomes]
rs2800237	0.80[AMR][1000 genomes]
rs2800238	0.85[AMR][1000 genomes];0.81[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs2800239	0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs2897233	0.84[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs56073443	0.86[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs58836662	0.81[AMR][1000 genomes];0.80[EUR][1000 genomes]

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:225049200-225051200	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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