Variant report

Variant rs2800230
Chromosome Location chr1:225061429-225061430
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:41 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:225056400-225063200 Weak transcription H9 Cell Line embryonic stem cell
2 chr1:225060200-225061600 Enhancers Fetal Brain Male brain
3 chr1:225060200-225063800 Enhancers Fetal Lung lung
4 chr1:225060200-225064200 Enhancers Fetal Intestine Small intestine
5 chr1:225060400-225061600 Enhancers H1 Cell Line embryonic stem cell
6 chr1:225060600-225062000 Enhancers Rectal Mucosa Donor 29 rectum
7 chr1:225060800-225062000 Enhancers HUES6 Cell Line embryonic stem cell
8 chr1:225060800-225062000 Enhancers HSMM muscle
9 chr1:225060800-225062200 Enhancers ES-I3 Cell Line embryonic stem cell
10 chr1:225060800-225062200 Enhancers iPS-18 Cell Line embryonic stem cell
11 chr1:225060800-225063200 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
12 chr1:225060800-225063200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
13 chr1:225060800-225063400 Enhancers iPS-20b Cell Line embryonic stem cell
14 chr1:225060800-225063400 Enhancers Fetal Stomach stomach
15 chr1:225060800-225064000 Enhancers Fetal Intestine Large intestine
16 chr1:225061000-225061800 Enhancers HUES48 Cell Line embryonic stem cell
17 chr1:225061000-225061800 Enhancers HUES64 Cell Line embryonic stem cell
18 chr1:225061000-225062000 Enhancers HMEC breast
19 chr1:225061000-225062000 Enhancers Osteobl bone
20 chr1:225061000-225062200 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
21 chr1:225061000-225062200 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
22 chr1:225061000-225062800 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
23 chr1:225061000-225062800 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
24 chr1:225061000-225062800 Enhancers Rectal Mucosa Donor 31 rectum
25 chr1:225061000-225063000 Enhancers HepG2 liver
26 chr1:225061000-225063200 Enhancers HSMMtube muscle
27 chr1:225061000-225063400 Enhancers Duodenum Smooth Muscle Duodenum
28 chr1:225061200-225061600 Enhancers Muscle Satellite Cultured Cells --
29 chr1:225061200-225061600 Bivalent Enhancer Fetal Kidney kidney
30 chr1:225061200-225061800 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
31 chr1:225061200-225062800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
32 chr1:225061200-225063000 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
33 chr1:225061200-225063000 Enhancers Colon Smooth Muscle Colon
34 chr1:225061200-225067200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
35 chr1:225061200-225068800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
36 chr1:225061400-225062400 Weak transcription Colonic Mucosa Colon
37 chr1:225061400-225062600 Weak transcription Ovary ovary
38 chr1:225061400-225062600 Weak transcription Pancreas Pancrea
39 chr1:225061400-225062800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
40 chr1:225061400-225063000 Weak transcription iPS-15b Cell Line embryonic stem cell
41 chr1:225061400-225063000 Enhancers Liver Liver

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