Variant report

Variant	rs10915725
Chromosome Location	chr1:225027731-225027732
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 16 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:16)

rs_ID	r²[population]
rs10915723	0.88[AFR][1000 genomes];0.92[AMR][1000 genomes];0.88[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs12120196	0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2248249	0.87[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs2405782	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2405783	0.81[EUR][1000 genomes]
rs2489312	0.85[ASN][1000 genomes]
rs2800230	0.90[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2800235	0.81[AMR][1000 genomes]
rs2800236	0.81[AMR][1000 genomes]
rs2800237	0.81[AMR][1000 genomes]
rs2800238	0.85[AMR][1000 genomes];0.81[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2800239	0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2897233	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs3856143	0.81[EUR][1000 genomes]
rs56073443	0.95[AFR][1000 genomes];0.99[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs58836662	0.91[AMR][1000 genomes];0.82[EUR][1000 genomes];0.96[ASN][1000 genomes]

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:225027000-225028600	Enhancers	iPS-20b Cell Line	embryonic stem cell
2	chr1:225027400-225028000	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
3	chr1:225027600-225028200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
4	chr1:225027600-225028600	Weak transcription	H9 Cell Line	embryonic stem cell
5	chr1:225027600-225028800	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
6	chr1:225027600-225029200	Weak transcription	HUES64 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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