Variant report

Variant rs2256371
Chromosome Location chr5:180239320-180239321
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:105 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:180236200-180239400 Active TSS Duodenum Smooth Muscle Duodenum
2 chr5:180237800-180241800 Flanking Active TSS Monocytes-CD14+_RO01746 blood
3 chr5:180238200-180245000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr5:180238400-180239400 Enhancers Primary T helper naive cells fromperipheralblood blood
5 chr5:180238400-180239400 Enhancers Primary T helper memory cells from peripheral blood 1 blood
6 chr5:180238400-180239600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
7 chr5:180238400-180239600 Enhancers Primary T helper memory cells from peripheral blood 2 blood
8 chr5:180238400-180242200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
9 chr5:180238400-180243400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
10 chr5:180238400-180243600 Weak transcription Cortex derived primary cultured neurospheres brain
11 chr5:180238600-180239400 Enhancers Primary B cells from peripheral blood blood
12 chr5:180238600-180239400 Enhancers Primary T cells fromperipheralblood blood
13 chr5:180238600-180239400 Enhancers Primary hematopoietic stem cells blood
14 chr5:180238600-180239400 Enhancers Primary T helper cells fromperipheralblood blood
15 chr5:180238600-180242200 Weak transcription Fetal Kidney kidney
16 chr5:180238600-180243600 Weak transcription NH-A brain
17 chr5:180238600-180244000 Weak transcription HSMMtube muscle
18 chr5:180238600-180244000 Weak transcription NHLF lung
19 chr5:180238800-180239400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
20 chr5:180238800-180239400 Enhancers Fetal Lung lung
21 chr5:180238800-180239400 Enhancers HMEC breast
22 chr5:180238800-180239600 Enhancers Primary T helper naive cells from peripheral blood blood
23 chr5:180238800-180242000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
24 chr5:180238800-180242200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
25 chr5:180238800-180242200 Weak transcription Osteobl bone
26 chr5:180238800-180243600 Weak transcription ES-I3 Cell Line embryonic stem cell
27 chr5:180238800-180243600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
28 chr5:180238800-180243600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
29 chr5:180238800-180243800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
30 chr5:180238800-180243800 Weak transcription iPS-20b Cell Line embryonic stem cell
31 chr5:180238800-180243800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
32 chr5:180238800-180243800 Weak transcription NHDF-Ad bronchial
33 chr5:180238800-180253200 Weak transcription A549 lung
34 chr5:180239000-180239600 Enhancers Pancreatic Islets Pancreatic Islet
35 chr5:180239000-180239800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
36 chr5:180239000-180239800 Enhancers HepG2 liver
37 chr5:180239000-180240200 Weak transcription Primary T cells from cord blood blood
38 chr5:180239000-180240200 Weak transcription Primary T killer naive cells fromperipheralblood blood
39 chr5:180239000-180240200 Weak transcription Rectal Smooth Muscle rectum
40 chr5:180239000-180240400 Weak transcription Psoas Muscle Psoas
41 chr5:180239000-180240600 Weak transcription Fetal Thymus thymus
42 chr5:180239000-180240800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
43 chr5:180239000-180241000 Weak transcription Colonic Mucosa Colon
44 chr5:180239000-180241200 Weak transcription Brain Anterior Caudate brain
45 chr5:180239000-180242000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
46 chr5:180239000-180242000 Weak transcription Right Ventricle heart
47 chr5:180239000-180242000 Weak transcription Spleen Spleen
48 chr5:180239000-180242200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
49 chr5:180239000-180242200 Weak transcription HUVEC blood vessel
50 chr5:180239000-180242400 Weak transcription HUES64 Cell Line embryonic stem cell

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