Variant report

Variant rs618717
Chromosome Location chr5:180239934-180239935
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:101 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:180237800-180241800 Flanking Active TSS Monocytes-CD14+_RO01746 blood
2 chr5:180238200-180245000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr5:180238400-180242200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
4 chr5:180238400-180243400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
5 chr5:180238400-180243600 Weak transcription Cortex derived primary cultured neurospheres brain
6 chr5:180238600-180242200 Weak transcription Fetal Kidney kidney
7 chr5:180238600-180243600 Weak transcription NH-A brain
8 chr5:180238600-180244000 Weak transcription HSMMtube muscle
9 chr5:180238600-180244000 Weak transcription NHLF lung
10 chr5:180238800-180242000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
11 chr5:180238800-180242200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
12 chr5:180238800-180242200 Weak transcription Osteobl bone
13 chr5:180238800-180243600 Weak transcription ES-I3 Cell Line embryonic stem cell
14 chr5:180238800-180243600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
15 chr5:180238800-180243600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
16 chr5:180238800-180243800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
17 chr5:180238800-180243800 Weak transcription iPS-20b Cell Line embryonic stem cell
18 chr5:180238800-180243800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
19 chr5:180238800-180243800 Weak transcription NHDF-Ad bronchial
20 chr5:180238800-180253200 Weak transcription A549 lung
21 chr5:180239000-180240200 Weak transcription Primary T cells from cord blood blood
22 chr5:180239000-180240200 Weak transcription Primary T killer naive cells fromperipheralblood blood
23 chr5:180239000-180240200 Weak transcription Rectal Smooth Muscle rectum
24 chr5:180239000-180240400 Weak transcription Psoas Muscle Psoas
25 chr5:180239000-180240600 Weak transcription Fetal Thymus thymus
26 chr5:180239000-180240800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
27 chr5:180239000-180241000 Weak transcription Colonic Mucosa Colon
28 chr5:180239000-180241200 Weak transcription Brain Anterior Caudate brain
29 chr5:180239000-180242000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
30 chr5:180239000-180242000 Weak transcription Right Ventricle heart
31 chr5:180239000-180242000 Weak transcription Spleen Spleen
32 chr5:180239000-180242200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
33 chr5:180239000-180242200 Weak transcription HUVEC blood vessel
34 chr5:180239000-180242400 Weak transcription HUES64 Cell Line embryonic stem cell
35 chr5:180239000-180243000 Active TSS Right Atrium heart
36 chr5:180239000-180243400 Weak transcription Primary T regulatory cells fromperipheralblood blood
37 chr5:180239000-180243600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
38 chr5:180239000-180243600 Weak transcription HUES6 Cell Line embryonic stem cell
39 chr5:180239000-180243600 Weak transcription iPS-18 Cell Line embryonic stem cell
40 chr5:180239000-180243600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
41 chr5:180239000-180243600 Weak transcription Fetal Stomach stomach
42 chr5:180239000-180244000 Weak transcription Placenta Amnion Placenta Amnion
43 chr5:180239000-180244800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
44 chr5:180239000-180245400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
45 chr5:180239000-180247400 Weak transcription Brain Substantia Nigra brain
46 chr5:180239200-180240200 Enhancers Primary monocytes fromperipheralblood blood
47 chr5:180239200-180240200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
48 chr5:180239200-180240200 Weak transcription Liver Liver
49 chr5:180239200-180240200 Weak transcription Fetal Adrenal Gland Adrenal Gland
50 chr5:180239200-180240200 Weak transcription Rectal Mucosa Donor 29 rectum

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