Variant report

Variant	rs2280283
Chromosome Location	chr4:152020777-152020778
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	EGR1	chr4:152020199-152020919	K562	blood:	n/a	chr4:152020735-152020745 chr4:152020477-152020487 chr4:152020737-152020750 chr4:152020475-152020489 chr4:152020475-152020488 chr4:152020738-152020747 chr4:152020474-152020489 chr4:152020476-152020487 chr4:152020615-152020625 chr4:152020737-152020750
2	POLR2A	chr4:152020241-152022005	PFSK-1	brain:	n/a	n/a
3	TEAD4	chr4:152020175-152021444	K562	blood:	n/a	n/a
4	CTCF	chr4:152020483-152020812	T-47D	breast:	n/a	n/a
5	CEBPB	chr4:152020359-152020952	HepG2	liver:	n/a	n/a
6	EGR1	chr4:152020233-152021012	K562	blood:	n/a	chr4:152020735-152020745 chr4:152020477-152020487 chr4:152020737-152020750 chr4:152020475-152020489 chr4:152020475-152020488 chr4:152020738-152020747 chr4:152020474-152020489 chr4:152020476-152020487 chr4:152020615-152020625 chr4:152020737-152020750
7	CEBPB	chr4:152020169-152021055	K562	blood:	n/a	n/a
8	BCLAF1	chr4:152020322-152021511	K562	blood:	n/a	n/a
9	REST	chr4:152020346-152020972	GM12878	blood:	n/a	chr4:152020666-152020686
10	ELF1	chr4:152019970-152021556	GM12878	blood:	n/a	chr4:152020692-152020705
11	TEAD4	chr4:152020329-152021536	ECC-1	luminal epithelium:	n/a	n/a
12	USF1	chr4:152020527-152020783	A549	lung:	n/a	n/a
13	NFIC	chr4:152020098-152021003	GM12878	blood:	n/a	n/a
14	CTCF	chr4:152020466-152020778	ECC-1	luminal epithelium:	n/a	n/a
15	HEY1	chr4:152020391-152021460	HepG2	liver:	n/a	n/a
16	POLR2A	chr4:152020269-152021439	HUVEC	blood vessel:	n/a	n/a
17	MAZ	chr4:152020123-152020979	GM12878	blood:	n/a	n/a
18	KAT2A	chr4:152020685-152021149	GM12878	blood:	n/a	n/a
19	BHLHE40	chr4:152020331-152021403	HepG2	liver:	n/a	n/a
20	CTCF	chr4:152020415-152020866	A549	lung:	n/a	n/a
21	EGR1	chr4:152020254-152020892	GM12878	blood:	n/a	chr4:152020735-152020745 chr4:152020477-152020487 chr4:152020737-152020750 chr4:152020475-152020489 chr4:152020475-152020488 chr4:152020738-152020747 chr4:152020474-152020489 chr4:152020476-152020487 chr4:152020615-152020625 chr4:152020737-152020750
22	POLR2A	chr4:152020311-152021571	K562	blood:	n/a	n/a
23	USF1	chr4:152020497-152020933	A549	lung:	n/a	n/a
24	HMGN3	chr4:152020404-152021332	K562	blood:	n/a	n/a
25	GABPA	chr4:152020485-152020939	GM12878	blood:	n/a	chr4:152020736-152020745
26	SIN3AK20	chr4:152020603-152020995	PFSK-1	brain:	n/a	n/a
27	CTCF	chr4:152020486-152020779	GM10248	blood:	n/a	n/a
28	SIN3AK20	chr4:152020103-152021454	MCF-7	breast:	n/a	n/a
29	EP300	chr4:152020290-152021136	A549	lung:	n/a	n/a
30	E2F6	chr4:152020164-152021453	K562	blood:	n/a	chr4:152020736-152020745
31	CTCF	chr4:152020493-152020779	GM12878	blood:	n/a	n/a
32	STAT1	chr4:152020247-152021128	GM12878	blood:	n/a	n/a
33	MAX	chr4:152020115-152021585	MCF-7	breast:	n/a	n/a
34	NFIC	chr4:152020236-152021046	HepG2	liver:	n/a	n/a
35	TEAD4	chr4:152020370-152021382	H1-hESC	embryonic stem cell:	n/a	n/a
36	POLR2A	chr4:152020326-152021507	H1-neurons	neurons:	n/a	n/a
37	MYC	chr4:152020344-152021489	K562	blood:	n/a	n/a
38	MAX	chr4:152020182-152021535	Hela-S3	cervix:	n/a	n/a
39	POLR2A	chr4:152020092-152021560	HepG2	liver:	n/a	n/a
40	CTCF	chr4:152020372-152020798	H1-hESC	embryonic stem cell:	n/a	n/a
41	BCLAF1	chr4:152020177-152020986	K562	blood:	n/a	n/a
42	TCF3	chr4:152020316-152021036	GM12878	blood:	n/a	n/a
43	POLR2A	chr4:152020319-152021267	GM10847	blood:	n/a	n/a
44	REST	chr4:152020330-152021274	H1-neurons	neurons:	n/a	chr4:152020666-152020686
45	CREB1	chr4:152020117-152021211	H1-hESC	embryonic stem cell:	n/a	n/a
46	CBX3	chr4:152020285-152020960	K562	blood:	n/a	n/a
47	EGR1	chr4:152020248-152020978	H1-hESC	embryonic stem cell:	n/a	chr4:152020735-152020745 chr4:152020477-152020487 chr4:152020737-152020750 chr4:152020475-152020489 chr4:152020475-152020488 chr4:152020738-152020747 chr4:152020474-152020489 chr4:152020476-152020487 chr4:152020615-152020625 chr4:152020737-152020750
48	CTCF	chr4:152020378-152020929	MCF-7	breast:	n/a	n/a
49	YY1	chr4:152020442-152021196	K562	blood:	n/a	chr4:152020736-152020745
50	POLR2A	chr4:152020201-152022107	GM18951	blood:	n/a	n/a

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr4:152020739-152020789	ovcar-3	ovarian:	n/a
2	chr4:152020739-152020789	HEK293	kidney:	embryo
3	chr4:152020739-152020789	SKMC	muscle:	n/a
4	chr4:152020739-152020789	HAEpiC	amniotic membrane:	n/a
5	chr4:152020739-152020789	HNPCEpiC	eye:	n/a
6	chr4:152020739-152020789	GM12891	blood:	n/a
7	chr4:152020739-152020789	NB4	blood:	n/a
8	chr4:152020739-152020789	NH-A	brain:	n/a
9	chr4:152020739-152020789	HCPEpiC	choroid plexus:	n/a
10	chr4:152020739-152020789	CMK	blood:	n/a
11	chr4:152020739-152020789	HEEpiC	esophagus:	n/a
12	chr4:152020739-152020789	NHDF-neo	bronchial:	n/a
13	chr4:152020739-152020789	AG09309	skin:	n/a
14	chr4:152020739-152020789	IMR90	lung:	fetal
15	chr4:152020739-152020789	K562	blood:	n/a
16	chr4:152020739-152020789	HIPEpiC	eye:	n/a
17	chr4:152020739-152020789	HPAEpiC	pulmonary alveolar:	n/a
18	chr4:152020739-152020789	PANC-1	pancreas:	n/a
19	chr4:152020739-152020789	AoSMC	blood vessel:	n/a
20	chr4:152020739-152020789	Caco-2	colon:	n/a
21	chr4:152020739-152020789	AG09319	gingival:	n/a
22	chr4:152020739-152020789	ECC-1	luminal epithelium:	n/a
23	chr4:152020739-152020789	HepG2	liver:	n/a
24	chr4:152020739-152020789	HRPEpiC	eye:	n/a
25	chr4:152020739-152020789	Hela-S3	cervix:	n/a
26	chr4:152020739-152020789	GM19239	blood:	n/a
27	chr4:152020739-152020789	BE2_C	brain:	n/a
28	chr4:152020739-152020789	PFSK-1	brain:	n/a
29	chr4:152020739-152020789	HRE	kidney:	n/a
30	chr4:152020739-152020789	AG04450	lung:	fetal
31	chr4:152020739-152020789	SAEC	small airway:	n/a
32	chr4:152020739-152020789	H1-hESC	embryonic stem cell:	embryo
33	chr4:152020739-152020789	PrEC	prostate:	n/a
34	chr4:152020739-152020789	AG10803	skin:	n/a
35	chr4:152020739-152020789	LNCaP	prostate:	n/a
36	chr4:152020739-152020789	HCF	heart:	n/a
37	chr4:152020739-152020789	HRCEpiC	kidney:	n/a
38	chr4:152020739-152020789	ProgFib	skin:	n/a
39	chr4:152020739-152020789	GM12878	blood:	n/a
40	chr4:152020739-152020789	BJ	skin:	n/a
41	chr4:152020739-152020789	HCT-116	colon:	n/a
42	chr4:152020739-152020789	RPTEC	kidney:	n/a
43	chr4:152020739-152020789	MCF10A-Er-Src	breast:	n/a
44	chr4:152020739-152020789	NT2-D1	testis:	n/a
45	chr4:152020739-152020789	HMEC	breast:	n/a
46	chr4:152020739-152020789	A549	lung:	n/a
47	chr4:152020739-152020789	GM06990	blood:	n/a
48	chr4:152020739-152020789	HL-60	blood:	n/a
49	chr4:152020739-152020789	HCM	heart:	n/a
50	chr4:152020739-152020789	NHBE	bronchial:	n/a

No.	Distal block	Cell Line	Cell type
1	chr4:151936372..151937048-chr4:152020467..152021117,2	MCF-7	breast:
2	chr4:152020214..152021177-chr5:87564239..87564851,2	HCT-116	colon:
3	chr4:151932388..151938493-chr4:152018908..152023577,12	K562	blood:
4	chr4:151932388..151938967-chr4:152018772..152026013,16	K562	blood:
5	chr1:89149521..89150460-chr4:152020444..152021043,2	Hela-S3	cervix:
6	chr4:152019186..152022865-chr4:152245245..152246932,3	MCF-7	breast:
7	chr4:151935351..151938924-chr4:152018981..152022393,11	MCF-7	breast:
8	chr4:151934961..151939391-chr4:152019005..152023866,18	MCF-7	breast:
9	chr4:152019364..152021476-chr4:152328335..152331101,2	MCF-7	breast:
10	chr4:152019971..152022516-chr4:152039598..152042483,2	MCF-7	breast:
11	chr4:152020522..152021141-chr5:10353489..10354263,2	Hela-S3	cervix:

Variant related genes	Relation type
RPS3A	TF binding region
ENSG00000201264	TF binding region
SNORD73A	TF binding region
ENSG00000201264	CpG island
RPS3A	CpG island
SNORD73A	CpG island
ENSG00000247828	Chromatin interaction
ENSG00000164180	Chromatin interaction
ENSG00000109686	Chromatin interaction
ENSG00000251611	Chromatin interaction
ENSG00000198589	Chromatin interaction
ENSG00000259802	Chromatin interaction
ENSG00000164142	Chromatin interaction
ENSG00000145495	Chromatin interaction
ENSG00000065243	Chromatin interaction

Extended variants
information (count: 79 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:53)

rs_ID	r²[population]
rs10009307	0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10020317	0.85[JPT][hapmap]
rs10434137	0.85[JPT][hapmap]
rs10520101	0.85[JPT][hapmap]
rs10520102	0.85[JPT][hapmap]
rs10776522	0.85[JPT][hapmap]
rs10857253	0.85[JPT][hapmap]
rs11733964	0.85[JPT][hapmap]
rs11734577	0.85[JPT][hapmap]
rs11934792	0.85[JPT][hapmap]
rs11940627	0.87[ASN][1000 genomes]
rs12501643	1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12505974	0.85[JPT][hapmap]
rs12508270	0.94[CHB][hapmap];0.88[CHD][hapmap];1.00[JPT][hapmap]
rs12512856	1.00[CEU][hapmap];0.92[JPT][hapmap]
rs12644496	0.85[JPT][hapmap]
rs12647306	0.85[JPT][hapmap]
rs13101417	0.85[JPT][hapmap]
rs13141515	0.84[JPT][hapmap]
rs13145829	0.85[JPT][hapmap]
rs17633530	0.94[CHB][hapmap];1.00[JPT][hapmap]
rs17633600	0.94[CHB][hapmap];0.84[CHD][hapmap];1.00[JPT][hapmap]
rs1875308	1.00[CEU][hapmap]
rs2280280	0.83[JPT][hapmap]
rs2407167	1.00[CEU][hapmap]
rs2407168	1.00[CEU][hapmap]
rs2407220	1.00[CEU][hapmap]
rs2407221	1.00[CEU][hapmap]
rs2407412	0.85[JPT][hapmap]
rs2407417	0.85[JPT][hapmap]
rs28593016	0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs28694456	0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2897659	0.85[JPT][hapmap]
rs3736502	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs3762846	0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs3792611	0.85[JPT][hapmap]
rs4266274	0.85[JPT][hapmap]
rs4696234	0.85[JPT][hapmap]
rs4696658	0.85[JPT][hapmap]
rs6535764	0.84[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.88[LWK][hapmap];1.00[MEX][hapmap];0.95[MKK][hapmap];1.00[TSI][hapmap];0.85[AFR][1000 genomes];0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6535784	1.00[CEU][hapmap]
rs6846323	0.85[JPT][hapmap]
rs6847518	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6850311	1.00[CEU][hapmap]
rs72963696	0.87[ASN][1000 genomes]
rs7439970	0.83[JPT][hapmap]
rs7656771	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7664483	0.85[JPT][hapmap]
rs7669180	0.80[CHD][hapmap];0.85[JPT][hapmap]
rs7675432	1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7682480	0.83[AFR][1000 genomes];0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7691584	0.85[JPT][hapmap]
rs7699495	0.86[EUR][1000 genomes];0.89[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:26 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1034948	chr4:151590115-152202687	Weak transcription Strong transcription Enhancers Active TSS Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	38 gene(s)	inside rSNPs	diseases
2	nsv537302	chr4:151590115-152202687	ZNF genes & repeats Weak transcription Active TSS Flanking Active TSS Enhancers Strong transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	38 gene(s)	inside rSNPs	diseases
3	nsv530159	chr4:151624865-152203910	Weak transcription Strong transcription Enhancers Flanking Active TSS ZNF genes & repeats Active TSS Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	38 gene(s)	inside rSNPs	diseases
4	nsv1018404	chr4:151664438-152067409	Weak transcription Flanking Active TSS Strong transcription Enhancers Active TSS Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	35 gene(s)	inside rSNPs	diseases
5	nsv1017850	chr4:151664438-152071876	Active TSS Weak transcription Strong transcription Flanking Active TSS Enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	35 gene(s)	inside rSNPs	diseases
6	esv2763837	chr4:151664438-152071888	Weak transcription Enhancers Flanking Active TSS Strong transcription Genic enhancers Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	35 gene(s)	inside rSNPs	diseases
7	nsv870257	chr4:151665349-152072867	Strong transcription Weak transcription Active TSS Genic enhancers Flanking Active TSS Enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	35 gene(s)	inside rSNPs	diseases
8	nsv1015387	chr4:151673751-152071876	Weak transcription Strong transcription Enhancers Flanking Active TSS ZNF genes & repeats Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	35 gene(s)	inside rSNPs	diseases
9	nsv526976	chr4:151675819-152055073	Weak transcription Flanking Active TSS Enhancers Strong transcription Active TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	34 gene(s)	inside rSNPs	diseases
10	nsv1025077	chr4:151682266-152035733	Strong transcription Enhancers Flanking Active TSS Genic enhancers Active TSS Weak transcription Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	31 gene(s)	inside rSNPs	diseases
11	nsv537303	chr4:151682266-152035733	Strong transcription Weak transcription Genic enhancers Enhancers Active TSS Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	31 gene(s)	inside rSNPs	diseases
12	nsv949066	chr4:151693149-152069566	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS Enhancers Bivalent/Poised TSS ZNF genes & repeats Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	35 gene(s)	inside rSNPs	diseases
13	nsv949002	chr4:151693149-152095109	Strong transcription Weak transcription Enhancers Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Active TSS ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	35 gene(s)	inside rSNPs	diseases
14	nsv948719	chr4:151693149-152161625	Weak transcription Bivalent/Poised TSS Strong transcription Genic enhancers Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	35 gene(s)	inside rSNPs	diseases
15	nsv1031720	chr4:151708502-152071876	Strong transcription Weak transcription Enhancers Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Active TSS Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	35 gene(s)	inside rSNPs	diseases
16	nsv880262	chr4:151712054-152519899	Enhancers Weak transcription Strong transcription Bivalent Enhancer Active TSS Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	53 gene(s)	inside rSNPs	diseases
17	nsv1031516	chr4:151718614-152065644	Weak transcription Enhancers Strong transcription Active TSS ZNF genes & repeats Flanking Active TSS Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	35 gene(s)	inside rSNPs	diseases
18	nsv537304	chr4:151718614-152065644	Flanking Active TSS Weak transcription Strong transcription Enhancers Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	35 gene(s)	inside rSNPs	diseases
19	nsv1022884	chr4:151718814-152065505	Strong transcription Weak transcription Enhancers Flanking Active TSS Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	35 gene(s)	inside rSNPs	diseases
20	nsv537305	chr4:151718814-152065505	Enhancers Weak transcription Transcr. at gene 5' and 3' Strong transcription Active TSS ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	35 gene(s)	inside rSNPs	diseases
21	nsv595690	chr4:151788955-152109552	Enhancers Strong transcription Weak transcription Flanking Active TSS Bivalent Enhancer Genic enhancers Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	35 gene(s)	inside rSNPs	diseases
22	nsv1026416	chr4:151847403-152105879	Transcr. at gene 5' and 3' Enhancers Strong transcription Flanking Active TSS Weak transcription Active TSS Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	35 gene(s)	inside rSNPs	diseases
23	nsv1018797	chr4:151913585-152073419	Flanking Active TSS Active TSS Weak transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers Strong transcription Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	34 gene(s)	inside rSNPs	diseases
24	nsv881526	chr4:151968295-152489087	Flanking Active TSS Enhancers Active TSS Strong transcription Weak transcription Transcr. at gene 5' and 3' Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	33 gene(s)	inside rSNPs	diseases
25	nsv1016220	chr4:151997139-152164126	Flanking Active TSS Strong transcription Enhancers Weak transcription Genic enhancers Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	16 gene(s)	inside rSNPs	diseases
26	nsv537306	chr4:151997139-152164126	Strong transcription Enhancers Weak transcription Active TSS Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	16 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:125 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:152019400-152021000	Active TSS	A549	lung
2	chr4:152019800-152021800	Active TSS	Rectal Mucosa Donor 31	rectum
3	chr4:152020000-152021000	Active TSS	HUES6 Cell Line	embryonic stem cell
4	chr4:152020000-152021000	Active TSS	HUES64 Cell Line	embryonic stem cell
5	chr4:152020000-152021000	Active TSS	iPS-20b Cell Line	embryonic stem cell
6	chr4:152020000-152021000	Active TSS	Foreskin Keratinocyte Primary Cells skin02	Skin
7	chr4:152020000-152021200	Active TSS	Brain Cingulate Gyrus	brain
8	chr4:152020000-152021400	Active TSS	Thymus	Thymus
9	chr4:152020000-152021600	Active TSS	ES-I3 Cell Line	embryonic stem cell
10	chr4:152020000-152021600	Active TSS	Primary T helper naive cells from peripheral blood	blood
11	chr4:152020000-152021600	Active TSS	Brain Anterior Caudate	brain
12	chr4:152020000-152021800	Active TSS	H9 Cell Line	embryonic stem cell
13	chr4:152020000-152021800	Active TSS	HUES48 Cell Line	embryonic stem cell
14	chr4:152020000-152021800	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
15	chr4:152020000-152021800	Active TSS	Primary T helper memory cells from peripheral blood 2	blood
16	chr4:152020000-152021800	Active TSS	Primary T cells effector/memory enriched fromperipheralblood	blood
17	chr4:152020000-152021800	Active TSS	Fetal Kidney	kidney
18	chr4:152020000-152021800	Active TSS	Pancreatic Islets	Pancreatic Islet
19	chr4:152020000-152021800	Active TSS	Rectal Mucosa Donor 29	rectum
20	chr4:152020000-152021800	Active TSS	Hela-S3	cervix
21	chr4:152020000-152021800	Active TSS	NH-A	brain
22	chr4:152020000-152022000	Active TSS	Duodenum Smooth Muscle	Duodenum
23	chr4:152020000-152022600	Active TSS	ES-WA7 Cell Line	embryonic stem cell
24	chr4:152020000-152022600	Active TSS	Rectal Smooth Muscle	rectum
25	chr4:152020200-152020800	Active TSS	Primary T helper naive cells fromperipheralblood	blood
26	chr4:152020200-152020800	Active TSS	Primary T helper 17 cells PMA-I stimulated	--
27	chr4:152020200-152021200	Active TSS	iPS-18 Cell Line	embryonic stem cell
28	chr4:152020200-152021200	Active TSS	Primary T helper memory cells from peripheral blood 1	blood
29	chr4:152020200-152021200	Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
30	chr4:152020200-152021400	Active TSS	Primary T killer naive cells fromperipheralblood	blood
31	chr4:152020200-152021600	Active TSS	Primary T killer memory cells from peripheral blood	blood
32	chr4:152020200-152021600	Active TSS	Colon Smooth Muscle	Colon
33	chr4:152020200-152021600	Active TSS	Fetal Brain Male	brain
34	chr4:152020200-152021600	Active TSS	Fetal Brain Female	brain
35	chr4:152020200-152021600	Active TSS	Small Intestine	intestine
36	chr4:152020200-152021800	Active TSS	H1 Cell Line	embryonic stem cell
37	chr4:152020200-152021800	Active TSS	H9 Derived Neuron Cultured Cells	ES cell derived
38	chr4:152020200-152021800	Active TSS	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
39	chr4:152020200-152021800	Active TSS	iPS DF 6.9 Cell Line	embryonic stem cell
40	chr4:152020200-152021800	Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
41	chr4:152020200-152021800	Active TSS	Foreskin Melanocyte Primary Cells skin03	Skin
42	chr4:152020200-152021800	Active TSS	Aorta	Aorta
43	chr4:152020200-152021800	Active TSS	Brain Angular Gyrus	brain
44	chr4:152020200-152021800	Active TSS	Fetal Stomach	stomach
45	chr4:152020200-152021800	Active TSS	Stomach Mucosa	stomach
46	chr4:152020200-152021800	Active TSS	NHDF-Ad	bronchial
47	chr4:152020200-152021800	Active TSS	NHLF	lung
48	chr4:152020200-152022000	Active TSS	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
49	chr4:152020200-152022000	Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
50	chr4:152020200-152022000	Active TSS	Esophagus	oesophagus

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