Variant report

Variant	rs4696658
Chromosome Location	chr4:152024326-152024327
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:32)
CpG islands
(count:61)
Chromatin interactive
region (count:2)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:32 , 50 per page) page: 1

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	POLR2A	chr4:152023579-152029754	K562	blood:	n/a	n/a
2	POLR2A	chr4:152024304-152024628	K562	blood:	n/a	n/a
3	HEY1	chr4:152023933-152024621	K562	blood:	n/a	n/a
4	POLR2A	chr4:152023087-152029198	HepG2	liver:	n/a	n/a
5	POLR2A	chr4:152023941-152024601	H1-hESC	embryonic stem cell:	n/a	n/a
6	POLR2A	chr4:152023923-152024424	GM12878	blood:	n/a	n/a
7	POLR2A	chr4:152024160-152024608	K562	blood:	n/a	n/a
8	POLR2A	chr4:152024177-152024703	A549	lung:	n/a	n/a
9	POLR2A	chr4:152023464-152029233	K562	blood:	n/a	n/a
10	POLR2A	chr4:152024152-152024866	HepG2	liver:	n/a	n/a
11	POLR2A	chr4:152024221-152024659	U87	brain:	n/a	n/a
12	POLR2A	chr4:152019349-152025502	GM12878	blood:	n/a	n/a
13	POLR2A	chr4:152024185-152024594	HCT-116	colon:	n/a	n/a
14	POLR2A	chr4:152023423-152024355	SK-N-MC	brain:	n/a	n/a
15	POLR2A	chr4:152024141-152024657	SK-N-SH	brain:	n/a	n/a
16	POLR2A	chr4:152023601-152025076	GM12878	blood:	n/a	n/a
17	POLR2A	chr4:152023317-152024350	U87	brain:	n/a	n/a
18	POLR2A	chr4:152023165-152029250	K562	blood:	n/a	n/a
19	POLR2A	chr4:152024282-152024682	MCF-7	breast:	n/a	n/a
20	POLR2A	chr4:152023560-152024374	GM12892	blood:	n/a	n/a
21	POLR2A	chr4:152024150-152024574	Hela-S3	cervix:	n/a	n/a
22	POLR2A	chr4:152023540-152025529	HepG2	liver:	n/a	n/a
23	POLR2A	chr4:152023363-152024516	H1-hESC	embryonic stem cell:	n/a	n/a
24	POLR2A	chr4:152020280-152029909	K562	blood:	n/a	n/a
25	POLR2A	chr4:152023178-152029861	HepG2	liver:	n/a	n/a
26	POLR2A	chr4:152022863-152029688	PFSK-1	brain:	n/a	n/a
27	POLR2A	chr4:152024221-152024559	U87	brain:	n/a	n/a
28	HEY1	chr4:152023872-152024553	HepG2	liver:	n/a	n/a
29	POLR2A	chr4:152022389-152029763	K562	blood:	n/a	n/a
30	POLR2A	chr4:152024309-152025536	HepG2	liver:	n/a	n/a
31	POLR2A	chr4:152023072-152025251	PFSK-1	brain:	n/a	n/a
32	POLR2A	chr4:152023481-152029833	GM12891	blood:	n/a	n/a

(count:61 , 50 per page) page: 1 2

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr4:152024299-152024349	LNCaP	prostate:	n/a
2	chr4:152024299-152024349	GM06990	blood:	n/a
3	chr4:152024299-152024349	MCF10A-Er-Src	breast:	n/a
4	chr4:152024299-152024349	NHBE	bronchial:	n/a
5	chr4:152024299-152024349	AG10803	skin:	n/a
6	chr4:152024299-152024349	ProgFib	skin:	n/a
7	chr4:152024299-152024349	HEK293	kidney:	embryo
8	chr4:152024299-152024349	Jurkat	blood:	n/a
9	chr4:152024299-152024349	HCM	heart:	n/a
10	chr4:152024299-152024349	H1-hESC	embryonic stem cell:	embryo
11	chr4:152024299-152024349	Caco-2	colon:	n/a
12	chr4:152024299-152024349	IMR90	lung:	fetal
13	chr4:152024299-152024349	PANC-1	pancreas:	n/a
14	chr4:152024299-152024349	HCPEpiC	choroid plexus:	n/a
15	chr4:152024299-152024349	SK-N-SH_RA	brain:	n/a
16	chr4:152024299-152024349	HCT-116	colon:	n/a
17	chr4:152024299-152024349	HRE	kidney:	n/a
18	chr4:152024299-152024349	AG09319	gingival:	n/a
19	chr4:152024299-152024349	Hela-S3	cervix:	n/a
20	chr4:152024299-152024349	AG09309	skin:	n/a
21	chr4:152024299-152024349	U87	brain:	n/a
22	chr4:152024299-152024349	PFSK-1	brain:	n/a
23	chr4:152024299-152024349	CMK	blood:	n/a
24	chr4:152024299-152024349	SAEC	small airway:	n/a
25	chr4:152024299-152024349	BJ	skin:	n/a
26	chr4:152024299-152024349	AG04449	skin:	fetal
27	chr4:152024299-152024349	SKMC	muscle:	n/a
28	chr4:152024299-152024349	SK-N-MC	brain:	n/a
29	chr4:152024299-152024349	NHDF-neo	bronchial:	n/a
30	chr4:152024299-152024349	HRCEpiC	kidney:	n/a
31	chr4:152024299-152024349	ovcar-3	ovarian:	n/a
32	chr4:152024299-152024349	PrEC	prostate:	n/a
33	chr4:152024299-152024349	SK-N-SH	brain:	n/a
34	chr4:152024299-152024349	AoSMC	blood vessel:	n/a
35	chr4:152024299-152024349	HNPCEpiC	eye:	n/a
36	chr4:152024299-152024349	HepG2	liver:	n/a
37	chr4:152024299-152024349	Hepatocyte	liver:	n/a
38	chr4:152024299-152024349	HUVEC	blood vessel:	n/a
39	chr4:152024299-152024349	K562	blood:	n/a
40	chr4:152024299-152024349	AG04450	lung:	fetal
41	chr4:152024299-152024349	HL-60	blood:	n/a
42	chr4:152024299-152024349	BE2_C	brain:	n/a
43	chr4:152024299-152024349	NB4	blood:	n/a
44	chr4:152024299-152024349	MCF-7	breast:	n/a
45	chr4:152024299-152024349	HAEpiC	amniotic membrane:	n/a
46	chr4:152024299-152024349	ECC-1	luminal epithelium:	n/a
47	chr4:152024299-152024349	RPTEC	kidney:	n/a
48	chr4:152024299-152024349	A549	lung:	n/a
49	chr4:152024299-152024349	T-47D	breast:	n/a
50	chr4:152024299-152024349	HRPEpiC	eye:	n/a

(count:2 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr4:151936828..151939237-chr4:152023678..152025434,2	K562	blood:
2	chr4:151932388..151938967-chr4:152018772..152026013,16	K562	blood:

No data

Variant related genes	Relation type
SNORD73A	TF binding region
SNORD73A	CpG island
ENSG00000198589	Chromatin interaction

Extended variants
information (count: 102 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:75)

rs_ID	r²[population]
rs10020317	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];0.97[CHD][hapmap];0.94[GIH][hapmap];1.00[JPT][hapmap];0.93[LWK][hapmap];0.93[MEX][hapmap];0.86[MKK][hapmap];0.94[TSI][hapmap];0.90[YRI][hapmap];0.88[AFR][1000 genomes];0.81[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs10030785	0.83[GIH][hapmap]
rs10434137	0.85[ASW][hapmap];0.95[CHB][hapmap];0.86[CHD][hapmap];1.00[JPT][hapmap]
rs10461253	0.84[AFR][1000 genomes];0.85[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs10520101	0.95[CHB][hapmap];0.86[CHD][hapmap];1.00[JPT][hapmap];0.80[MEX][hapmap]
rs10520102	0.95[CHB][hapmap];0.86[CHD][hapmap];1.00[JPT][hapmap];0.80[MEX][hapmap]
rs10776522	0.95[CHB][hapmap];1.00[JPT][hapmap]
rs10857253	0.86[ASW][hapmap];0.82[CEU][hapmap];0.95[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.86[LWK][hapmap];0.90[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.85[AFR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10857254	0.86[GIH][hapmap]
rs11099781	0.95[CHB][hapmap];0.80[CHD][hapmap];0.86[JPT][hapmap];0.88[MEX][hapmap];0.83[TSI][hapmap]
rs11733964	0.86[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.86[LWK][hapmap];1.00[MEX][hapmap];0.95[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.90[AFR][1000 genomes];0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11734577	1.00[ASW][hapmap];1.00[CHB][hapmap];0.97[CHD][hapmap];0.94[GIH][hapmap];1.00[JPT][hapmap];0.93[LWK][hapmap];0.93[MEX][hapmap];0.83[MKK][hapmap];0.94[TSI][hapmap];0.90[YRI][hapmap];0.89[AFR][1000 genomes];0.83[ASN][1000 genomes]
rs11734586	0.86[GIH][hapmap]
rs11934792	0.93[ASW][hapmap];1.00[CHB][hapmap];0.94[CHD][hapmap];1.00[JPT][hapmap];0.87[MEX][hapmap];0.83[ASN][1000 genomes]
rs11938266	0.86[GIH][hapmap]
rs11938717	0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12505974	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.94[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.94[TSI][hapmap];0.84[AFR][1000 genomes];0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12508270	0.85[JPT][hapmap]
rs12641297	0.94[CHB][hapmap];0.83[CHD][hapmap];0.86[JPT][hapmap];0.81[MEX][hapmap];0.83[TSI][hapmap]
rs12644496	0.93[ASW][hapmap];0.95[CHB][hapmap];0.91[CHD][hapmap];1.00[JPT][hapmap];0.87[MEX][hapmap]
rs12647306	0.93[ASW][hapmap];0.95[CHB][hapmap];0.91[CHD][hapmap];1.00[JPT][hapmap];0.87[MEX][hapmap]
rs12648512	0.89[AFR][1000 genomes];0.84[ASN][1000 genomes]
rs13101417	0.86[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.86[LWK][hapmap];0.86[MEX][hapmap];0.95[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.90[AFR][1000 genomes];0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs13122245	0.90[AFR][1000 genomes];0.90[AMR][1000 genomes];0.95[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs13130167	0.88[AMR][1000 genomes];0.95[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs13141515	1.00[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.80[ASN][1000 genomes]
rs13145829	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.90[AFR][1000 genomes];0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1549512	0.95[CHB][hapmap];0.86[JPT][hapmap];0.88[MEX][hapmap];0.83[TSI][hapmap]
rs17633530	0.85[JPT][hapmap]
rs17633600	0.85[JPT][hapmap]
rs2098927	0.89[CHB][hapmap];0.86[JPT][hapmap]
rs2280280	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[AMR][1000 genomes];0.95[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2280283	0.85[JPT][hapmap]
rs2407406	0.86[GIH][hapmap]
rs2407410	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs2407412	0.85[ASW][hapmap];0.95[CHB][hapmap];0.86[CHD][hapmap];1.00[JPT][hapmap];0.87[MEX][hapmap]
rs2407417	0.95[CHB][hapmap];1.00[JPT][hapmap]
rs2407431	0.83[ASN][1000 genomes]
rs2407438	0.86[AFR][1000 genomes];0.83[ASN][1000 genomes]
rs2897657	0.86[GIH][hapmap]
rs2897659	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.80[MEX][hapmap];0.88[TSI][hapmap];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs3736502	0.85[JPT][hapmap]
rs3792611	1.00[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.90[YRI][hapmap];0.86[AFR][1000 genomes];0.88[AMR][1000 genomes];0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs4266274	0.85[ASW][hapmap];0.95[CHB][hapmap];0.89[CHD][hapmap];1.00[JPT][hapmap];0.87[MEX][hapmap]
rs4696226	0.89[GIH][hapmap]
rs4696229	0.86[GIH][hapmap]
rs4696234	0.95[CHB][hapmap];0.86[CHD][hapmap];1.00[JPT][hapmap];0.80[MEX][hapmap]
rs4696235	0.86[GIH][hapmap]
rs4996333	0.83[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs62344632	0.82[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs6535763	0.89[GIH][hapmap]
rs6535764	0.85[JPT][hapmap]
rs6816613	0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6816651	0.86[AFR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6818874	0.94[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6819599	0.89[GIH][hapmap]
rs6826863	0.89[GIH][hapmap]
rs6827056	0.82[AFR][1000 genomes];0.80[AMR][1000 genomes];0.93[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs6832257	0.83[AFR][1000 genomes];0.80[AMR][1000 genomes];0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs6833991	0.91[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs6844546	0.83[AFR][1000 genomes]
rs6846323	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.94[GIH][hapmap];1.00[JPT][hapmap];0.96[LWK][hapmap];1.00[MEX][hapmap];0.86[MKK][hapmap];0.94[TSI][hapmap];0.90[YRI][hapmap];0.89[AFR][1000 genomes];0.88[AMR][1000 genomes];0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6846981	0.89[AFR][1000 genomes];0.85[AMR][1000 genomes];0.92[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs6847597	0.88[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs6847927	0.85[GIH][hapmap]
rs7439970	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs7656771	0.85[JPT][hapmap]
rs7659146	0.86[GIH][hapmap]
rs7664483	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.92[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];0.94[TSI][hapmap];0.95[YRI][hapmap];0.90[AFR][1000 genomes];0.92[AMR][1000 genomes];0.95[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7668154	0.86[GIH][hapmap]
rs7669180	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.94[GIH][hapmap];1.00[JPT][hapmap];0.96[LWK][hapmap];1.00[MEX][hapmap];0.86[MKK][hapmap];0.94[TSI][hapmap];0.90[YRI][hapmap];0.86[AFR][1000 genomes];0.88[AMR][1000 genomes];0.95[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7675597	0.87[AMR][1000 genomes];0.81[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs7690329	0.86[GIH][hapmap]
rs7691584	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[YRI][hapmap];0.90[AFR][1000 genomes];0.92[AMR][1000 genomes];0.95[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs9994290	0.84[AFR][1000 genomes];0.91[EUR][1000 genomes];0.96[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:27 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1034948	chr4:151590115-152202687	Weak transcription Strong transcription Enhancers Active TSS Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	38 gene(s)	inside rSNPs	diseases
2	nsv537302	chr4:151590115-152202687	ZNF genes & repeats Weak transcription Active TSS Flanking Active TSS Enhancers Strong transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	38 gene(s)	inside rSNPs	diseases
3	nsv530159	chr4:151624865-152203910	Weak transcription Strong transcription Enhancers Flanking Active TSS ZNF genes & repeats Active TSS Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	38 gene(s)	inside rSNPs	diseases
4	nsv1018404	chr4:151664438-152067409	Weak transcription Flanking Active TSS Strong transcription Enhancers Active TSS Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	35 gene(s)	inside rSNPs	diseases
5	nsv1017850	chr4:151664438-152071876	Active TSS Weak transcription Strong transcription Flanking Active TSS Enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	35 gene(s)	inside rSNPs	diseases
6	esv2763837	chr4:151664438-152071888	Weak transcription Enhancers Flanking Active TSS Strong transcription Genic enhancers Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	35 gene(s)	inside rSNPs	diseases
7	nsv870257	chr4:151665349-152072867	Strong transcription Weak transcription Active TSS Genic enhancers Flanking Active TSS Enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	35 gene(s)	inside rSNPs	diseases
8	nsv1015387	chr4:151673751-152071876	Weak transcription Strong transcription Enhancers Flanking Active TSS ZNF genes & repeats Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	35 gene(s)	inside rSNPs	diseases
9	nsv526976	chr4:151675819-152055073	Weak transcription Flanking Active TSS Enhancers Strong transcription Active TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	34 gene(s)	inside rSNPs	diseases
10	nsv1025077	chr4:151682266-152035733	Strong transcription Enhancers Flanking Active TSS Genic enhancers Active TSS Weak transcription Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	31 gene(s)	inside rSNPs	diseases
11	nsv537303	chr4:151682266-152035733	Strong transcription Weak transcription Genic enhancers Enhancers Active TSS Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	31 gene(s)	inside rSNPs	diseases
12	nsv949066	chr4:151693149-152069566	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS Enhancers Bivalent/Poised TSS ZNF genes & repeats Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	35 gene(s)	inside rSNPs	diseases
13	nsv949002	chr4:151693149-152095109	Strong transcription Weak transcription Enhancers Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Active TSS ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	35 gene(s)	inside rSNPs	diseases
14	nsv948719	chr4:151693149-152161625	Weak transcription Bivalent/Poised TSS Strong transcription Genic enhancers Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	35 gene(s)	inside rSNPs	diseases
15	nsv1031720	chr4:151708502-152071876	Strong transcription Weak transcription Enhancers Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Active TSS Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	35 gene(s)	inside rSNPs	diseases
16	nsv880262	chr4:151712054-152519899	Enhancers Weak transcription Strong transcription Bivalent Enhancer Active TSS Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	53 gene(s)	inside rSNPs	diseases
17	nsv1031516	chr4:151718614-152065644	Weak transcription Enhancers Strong transcription Active TSS ZNF genes & repeats Flanking Active TSS Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	35 gene(s)	inside rSNPs	diseases
18	nsv537304	chr4:151718614-152065644	Flanking Active TSS Weak transcription Strong transcription Enhancers Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	35 gene(s)	inside rSNPs	diseases
19	nsv1022884	chr4:151718814-152065505	Strong transcription Weak transcription Enhancers Flanking Active TSS Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	35 gene(s)	inside rSNPs	diseases
20	nsv537305	chr4:151718814-152065505	Enhancers Weak transcription Transcr. at gene 5' and 3' Strong transcription Active TSS ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	35 gene(s)	inside rSNPs	diseases
21	nsv595690	chr4:151788955-152109552	Enhancers Strong transcription Weak transcription Flanking Active TSS Bivalent Enhancer Genic enhancers Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	35 gene(s)	inside rSNPs	diseases
22	nsv1026416	chr4:151847403-152105879	Transcr. at gene 5' and 3' Enhancers Strong transcription Flanking Active TSS Weak transcription Active TSS Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	35 gene(s)	inside rSNPs	diseases
23	nsv1018797	chr4:151913585-152073419	Flanking Active TSS Active TSS Weak transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers Strong transcription Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	34 gene(s)	inside rSNPs	diseases
24	nsv881526	chr4:151968295-152489087	Flanking Active TSS Enhancers Active TSS Strong transcription Weak transcription Transcr. at gene 5' and 3' Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	33 gene(s)	inside rSNPs	diseases
25	nsv1016220	chr4:151997139-152164126	Flanking Active TSS Strong transcription Enhancers Weak transcription Genic enhancers Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	16 gene(s)	inside rSNPs	diseases
26	nsv537306	chr4:151997139-152164126	Strong transcription Enhancers Weak transcription Active TSS Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	16 gene(s)	inside rSNPs	diseases
27	nsv964104	chr4:152022129-152028885	Active TSS Weak transcription Genic enhancers Strong transcription Transcr. at gene 5' and 3' Flanking Active TSS Enhancers	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:127 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:152021400-152025200	Transcr. at gene 5' and 3'	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
2	chr4:152021800-152025200	Transcr. at gene 5' and 3'	GM12878-XiMat	blood
3	chr4:152021800-152026200	Weak transcription	Aorta	Aorta
4	chr4:152022000-152024400	Genic enhancers	Primary T helper cells fromperipheralblood	blood
5	chr4:152022000-152024400	Weak transcription	Spleen	Spleen
6	chr4:152022000-152024600	Weak transcription	Stomach Mucosa	stomach
7	chr4:152022000-152026000	Weak transcription	Gastric	stomach
8	chr4:152022000-152026400	Weak transcription	Esophagus	oesophagus
9	chr4:152022400-152024400	Transcr. at gene 5' and 3'	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
10	chr4:152022400-152024400	Transcr. at gene 5' and 3'	Breast Myoepithelial Primary Cells	Breast
11	chr4:152022400-152029800	Strong transcription	Fetal Muscle Trunk	muscle
12	chr4:152022600-152025600	Strong transcription	Placenta Amnion	Placenta Amnion
13	chr4:152022600-152028400	Strong transcription	Left Ventricle	heart
14	chr4:152022800-152025000	Strong transcription	Fetal Stomach	stomach
15	chr4:152022800-152025400	Weak transcription	Brain Angular Gyrus	brain
16	chr4:152022800-152026200	Strong transcription	NHDF-Ad	bronchial
17	chr4:152022800-152026400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
18	chr4:152022800-152027000	Strong transcription	iPS DF 6.9 Cell Line	embryonic stem cell
19	chr4:152022800-152028600	Strong transcription	Thymus	Thymus
20	chr4:152022800-152029200	Strong transcription	ES-I3 Cell Line	embryonic stem cell
21	chr4:152022800-152029200	Strong transcription	H9 Cell Line	embryonic stem cell
22	chr4:152022800-152029200	Strong transcription	Fetal Intestine Large	intestine
23	chr4:152022800-152029200	Strong transcription	Rectal Mucosa Donor 29	rectum
24	chr4:152022800-152029200	Strong transcription	Rectal Mucosa Donor 31	rectum
25	chr4:152022800-152029200	Strong transcription	Stomach Smooth Muscle	stomach
26	chr4:152022800-152029400	Strong transcription	Placenta	Placenta
27	chr4:152022800-152029600	Strong transcription	Primary monocytes fromperipheralblood	blood
28	chr4:152022800-152029800	Strong transcription	Primary neutrophils fromperipheralblood	blood
29	chr4:152022800-152029800	Strong transcription	Primary B cells from peripheral blood	blood
30	chr4:152022800-152031800	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
31	chr4:152022800-152031800	Strong transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
32	chr4:152022800-152032000	Strong transcription	ES-UCSF4 Cell Line	embryonic stem cell
33	chr4:152022800-152034400	Strong transcription	Monocytes-CD14+_RO01746	blood
34	chr4:152022800-152035800	Weak transcription	Right Atrium	heart
35	chr4:152022800-152069800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
36	chr4:152023000-152024400	Weak transcription	Small Intestine	intestine
37	chr4:152023000-152025600	Weak transcription	Brain Inferior Temporal Lobe	brain
38	chr4:152023000-152027800	Strong transcription	Colonic Mucosa	Colon
39	chr4:152023000-152028800	Strong transcription	Colon Smooth Muscle	Colon
40	chr4:152023000-152029000	Strong transcription	Ganglion Eminence derived primary cultured neurospheres	brain
41	chr4:152023000-152029200	Strong transcription	Duodenum Mucosa	Duodenum
42	chr4:152023000-152029200	Strong transcription	Fetal Adrenal Gland	Adrenal Gland
43	chr4:152023000-152029600	Strong transcription	iPS-18 Cell Line	embryonic stem cell
44	chr4:152023000-152029800	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
45	chr4:152023200-152024400	Strong transcription	ES-WA7 Cell Line	embryonic stem cell
46	chr4:152023200-152024800	Genic enhancers	Primary T helper memory cells from peripheral blood 1	blood
47	chr4:152023200-152024800	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
48	chr4:152023200-152024800	Genic enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
49	chr4:152023200-152025000	Weak transcription	Fetal Brain Male	brain
50	chr4:152023200-152026000	Strong transcription	Psoas Muscle	Psoas

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