Variant report

Variant	rs2282787
Chromosome Location	chr4:110930794-110930795
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs10010695	0.89[AFR][1000 genomes];0.96[AMR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10021697	0.82[EUR][1000 genomes]
rs1005903	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10857004	0.82[AFR][1000 genomes];0.96[AMR][1000 genomes];0.85[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs11098060	0.92[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs11569104	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs17041230	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2074392	0.98[AFR][1000 genomes];0.97[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28533412	0.83[EUR][1000 genomes]
rs3733626	0.88[AFR][1000 genomes];0.96[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56339535	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7653900	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7662362	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs971695	0.98[AFR][1000 genomes];0.97[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs971696	0.98[AFR][1000 genomes];0.97[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:16 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:110907000-110932400	Weak transcription	Psoas Muscle	Psoas
2	chr4:110910400-110935200	Weak transcription	Pancreas	Pancrea
3	chr4:110919000-110935200	Weak transcription	Left Ventricle	heart
4	chr4:110920800-110935800	Strong transcription	Skeletal Muscle Female	skeletal muscle
5	chr4:110926800-110931200	Enhancers	Liver	Liver
6	chr4:110927400-110931000	Strong transcription	Skeletal Muscle Male	skeletal muscle
7	chr4:110928400-110931400	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
8	chr4:110928400-110931400	Enhancers	Fetal Intestine Large	intestine
9	chr4:110930000-110930800	Weak transcription	Fetal Kidney	kidney
10	chr4:110930000-110937200	Weak transcription	Fetal Intestine Small	intestine
11	chr4:110930200-110932400	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
12	chr4:110930400-110941600	Weak transcription	Fetal Heart	heart
13	chr4:110930600-110930800	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
14	chr4:110930600-110931000	Enhancers	HUES6 Cell Line	embryonic stem cell
15	chr4:110930600-110931000	Enhancers	Cortex derived primary cultured neurospheres	brain
16	chr4:110930600-110931000	Enhancers	Brain Germinal Matrix	brain

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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