Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr4:110922594..110925099-chr4:111433371..111435082,2	MCF-7	breast:
2	chr4:110920202..110921754-chr4:110921805..110924269,2	K562	blood:

Variant related genes	Relation type
ENSG00000138792	Chromatin interaction

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs10010695	0.93[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs1005903	0.92[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs10857004	0.88[CEU][hapmap];0.93[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs11098061	0.83[EUR][1000 genomes]
rs11568943	0.87[CEU][hapmap]
rs11569104	0.88[CEU][hapmap];0.87[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs11569121	1.00[CEU][hapmap];0.85[EUR][1000 genomes]
rs11569126	0.87[CEU][hapmap]
rs17041230	0.92[AMR][1000 genomes]
rs2074392	0.88[CEU][hapmap];0.94[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs2237054	0.85[CHB][hapmap];0.90[JPT][hapmap];0.83[AMR][1000 genomes]
rs2282787	0.92[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs2298982	0.81[JPT][hapmap]
rs2299001	0.87[CEU][hapmap]
rs3733626	0.88[CEU][hapmap];0.93[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs4141078	0.82[JPT][hapmap]
rs56339535	0.92[AMR][1000 genomes]
rs56725761	0.90[EUR][1000 genomes]
rs6825106	0.88[CEU][hapmap]
rs7653900	0.92[AMR][1000 genomes]
rs7662362	0.92[AMR][1000 genomes]
rs7670908	0.88[CEU][hapmap]
rs971695	0.88[CEU][hapmap];0.94[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs971696	0.88[CEU][hapmap];0.94[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs9991367	0.88[CEU][hapmap]

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:110895000-110928600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr4:110901000-110929600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
3	chr4:110907000-110932400	Weak transcription	Psoas Muscle	Psoas
4	chr4:110907800-110927400	Weak transcription	Skeletal Muscle Male	skeletal muscle
5	chr4:110910400-110935200	Weak transcription	Pancreas	Pancrea
6	chr4:110910600-110929800	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
7	chr4:110910800-110926800	Weak transcription	Fetal Heart	heart
8	chr4:110919000-110935200	Weak transcription	Left Ventricle	heart
9	chr4:110920800-110935800	Strong transcription	Skeletal Muscle Female	skeletal muscle
10	chr4:110921000-110924800	Weak transcription	Fetal Intestine Large	intestine
11	chr4:110921000-110926800	Weak transcription	Duodenum Mucosa	Duodenum
12	chr4:110921000-110926800	Weak transcription	HepG2	liver
13	chr4:110921000-110927600	Weak transcription	Fetal Intestine Small	intestine

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