The 2.0 version of rSNPBase

Variant report

Variant rs2294492
Chromosome Location chr1:174127022-174127023
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:42 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:174120000-174128000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
2 chr1:174122200-174127600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
3 chr1:174122400-174127400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
4 chr1:174122800-174127400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
5 chr1:174122800-174127600 Weak transcription A549 lung
6 chr1:174123000-174127400 Weak transcription Primary T cells from cord blood blood
7 chr1:174123000-174127400 Weak transcription Primary T helper cells fromperipheralblood blood
8 chr1:174123200-174127200 Weak transcription Primary T helper naive cells fromperipheralblood blood
9 chr1:174123200-174127400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
10 chr1:174123200-174127400 Weak transcription Primary T killer naive cells fromperipheralblood blood
11 chr1:174123200-174127800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
12 chr1:174123600-174127400 Weak transcription Primary T regulatory cells fromperipheralblood blood
13 chr1:174124600-174127400 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
14 chr1:174125000-174127400 Enhancers K562 blood
15 chr1:174125000-174127600 Enhancers Primary T cells fromperipheralblood blood
16 chr1:174125600-174127600 Enhancers Fetal Heart heart
17 chr1:174125600-174127600 Enhancers HMEC breast
18 chr1:174125600-174127800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
19 chr1:174125600-174127800 Enhancers Primary B cells from peripheral blood blood
20 chr1:174125800-174127600 Weak transcription Right Atrium heart
21 chr1:174126000-174127600 Enhancers Primary T helper memory cells from peripheral blood 2 blood
22 chr1:174126000-174127600 Enhancers Primary T helper 17 cells PMA-I stimulated --
23 chr1:174126000-174127600 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
24 chr1:174126000-174127600 Enhancers NHEK skin
25 chr1:174126000-174127800 Enhancers Primary T helper memory cells from peripheral blood 1 blood
26 chr1:174126200-174127600 Enhancers Primary T helper cells PMA-I stimulated --
27 chr1:174126200-174127600 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
28 chr1:174126400-174127400 Weak transcription Primary T killer memory cells from peripheral blood blood
29 chr1:174126400-174127600 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
30 chr1:174126400-174127600 Enhancers Primary T helper naive cells from peripheral blood blood
31 chr1:174126400-174127600 Weak transcription Right Ventricle heart
32 chr1:174126400-174127800 Enhancers Primary B cells from cord blood blood
33 chr1:174126600-174127600 Enhancers Pancreatic Islets Pancreatic Islet
34 chr1:174126800-174127200 Weak transcription Hela-S3 cervix
35 chr1:174126800-174127400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
36 chr1:174126800-174127600 Enhancers Breast Myoepithelial Primary Cells Breast
37 chr1:174126800-174127600 Enhancers Thymus Thymus
38 chr1:174126800-174127800 Weak transcription Muscle Satellite Cultured Cells --
39 chr1:174126800-174128000 Flanking Active TSS GM12878-XiMat blood
40 chr1:174127000-174127400 Enhancers Dnd41 blood
41 chr1:174127000-174127600 Enhancers Primary hematopoietic stem cells short term culture blood
42 chr1:174127000-174127600 Enhancers Fetal Intestine Large intestine

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Last update: Aug 31, 2015