Variant report

Variant rs7552830
Chromosome Location chr1:174290781-174290782
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:32 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:174284600-174294600 Weak transcription Primary T helper naive cells from peripheral blood blood
2 chr1:174284800-174294400 Weak transcription Rectal Mucosa Donor 31 rectum
3 chr1:174285200-174294800 Weak transcription Right Ventricle heart
4 chr1:174285200-174295200 Weak transcription Brain Hippocampus Middle brain
5 chr1:174286000-174296400 Weak transcription Brain Angular Gyrus brain
6 chr1:174287000-174293800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
7 chr1:174287000-174296600 Weak transcription Skeletal Muscle Male skeletal muscle
8 chr1:174287200-174294600 Weak transcription Ovary ovary
9 chr1:174287200-174294800 Weak transcription Gastric stomach
10 chr1:174288400-174290800 ZNF genes & repeats Primary T helper cells fromperipheralblood blood
11 chr1:174288400-174292400 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
12 chr1:174288600-174292200 ZNF genes & repeats Primary B cells from cord blood blood
13 chr1:174288600-174292200 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
14 chr1:174289000-174292200 ZNF genes & repeats Primary B cells from peripheral blood blood
15 chr1:174289000-174295400 ZNF genes & repeats GM12878-XiMat blood
16 chr1:174289200-174292000 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
17 chr1:174289400-174291000 ZNF genes & repeats Rectal Mucosa Donor 29 rectum
18 chr1:174289400-174292200 ZNF genes & repeats Primary T helper 17 cells PMA-I stimulated --
19 chr1:174289600-174290800 ZNF genes & repeats Primary Natural Killer cells fromperipheralblood blood
20 chr1:174290000-174291000 ZNF genes & repeats Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
21 chr1:174290000-174291000 ZNF genes & repeats Liver Liver
22 chr1:174290200-174290800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
23 chr1:174290200-174291000 ZNF genes & repeats Primary T cells fromperipheralblood blood
24 chr1:174290200-174294600 Weak transcription Rectal Smooth Muscle rectum
25 chr1:174290600-174291200 Weak transcription Primary hematopoietic stem cells short term culture blood
26 chr1:174290600-174291400 Weak transcription Aorta Aorta
27 chr1:174290600-174292000 ZNF genes & repeats HUES64 Cell Line embryonic stem cell
28 chr1:174290600-174292200 ZNF genes & repeats Dnd41 blood
29 chr1:174290600-174294600 Weak transcription Duodenum Smooth Muscle Duodenum
30 chr1:174290600-174294600 Weak transcription Sigmoid Colon Sigmoid Colon
31 chr1:174290600-174294800 Weak transcription Lung lung
32 chr1:174290600-174294800 Weak transcription Pancreas Pancrea

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