Variant report
| Variant | rs2296376 |
|---|---|
| Chromosome Location | chr1:179055020-179055021 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr1:179052200-179062200 | Weak transcription | Small Intestine | intestine |
| 2 | chr1:179052400-179056000 | Weak transcription | Primary hematopoietic stem cells | blood |
| 3 | chr1:179052400-179056000 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 4 | chr1:179052400-179056200 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 5 | chr1:179052400-179056400 | Weak transcription | ES-WA7 Cell Line | embryonic stem cell |
| 6 | chr1:179052400-179056600 | Weak transcription | Right Atrium | heart |
| 7 | chr1:179052400-179056600 | Weak transcription | HUVEC | blood vessel |
| 8 | chr1:179052400-179058800 | Weak transcription | NH-A | brain |
| 9 | chr1:179052400-179059000 | Weak transcription | Psoas Muscle | Psoas |
| 10 | chr1:179052400-179060000 | Weak transcription | Brain Angular Gyrus | brain |
| 11 | chr1:179052400-179060200 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 12 | chr1:179052400-179060800 | Weak transcription | Fetal Lung | lung |
| 13 | chr1:179052400-179062600 | Weak transcription | Fetal Kidney | kidney |
| 14 | chr1:179052600-179056000 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
| 15 | chr1:179052600-179056200 | Weak transcription | iPS-20b Cell Line | embryonic stem cell |
| 16 | chr1:179052600-179056800 | Weak transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 17 | chr1:179052600-179057000 | Weak transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 18 | chr1:179052600-179058800 | Weak transcription | NHDF-Ad | bronchial |
| 19 | chr1:179052600-179064200 | Weak transcription | Fetal Brain Male | brain |
| 20 | chr1:179052800-179056200 | Weak transcription | HUES64 Cell Line | embryonic stem cell |
| 21 | chr1:179052800-179057400 | Weak transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 22 | chr1:179052800-179059400 | Weak transcription | Fetal Heart | heart |
| 23 | chr1:179053000-179055800 | Weak transcription | Primary T cells effector/memory enriched fromperipheralblood | blood |
| 24 | chr1:179053000-179056200 | Weak transcription | H9 Cell Line | embryonic stem cell |
| 25 | chr1:179053000-179056600 | Strong transcription | Fetal Adrenal Gland | Adrenal Gland |
| 26 | chr1:179053000-179059600 | Weak transcription | HSMM | muscle |
| 27 | chr1:179053000-179060400 | Strong transcription | Stomach Smooth Muscle | stomach |
| 28 | chr1:179053000-179072200 | Strong transcription | Primary T cells from cord blood | blood |
| 29 | chr1:179053200-179056200 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 30 | chr1:179053200-179056200 | Weak transcription | HUES48 Cell Line | embryonic stem cell |
| 31 | chr1:179053200-179056200 | Weak transcription | Primary T helper cells PMA-I stimulated | -- |
| 32 | chr1:179053200-179056600 | Genic enhancers | Dnd41 | blood |
| 33 | chr1:179053200-179057600 | Weak transcription | HMEC | breast |
| 34 | chr1:179053200-179057600 | Weak transcription | HSMMtube | muscle |
| 35 | chr1:179053200-179062400 | Weak transcription | Primary T killer memory cells from peripheral blood | blood |
| 36 | chr1:179053200-179063000 | Weak transcription | Primary T helper memory cells from peripheral blood 2 | blood |
| 37 | chr1:179053200-179064000 | Weak transcription | Primary T killer naive cells fromperipheralblood | blood |
| 38 | chr1:179053200-179067600 | Strong transcription | Primary hematopoietic stem cells short term culture | blood |
| 39 | chr1:179053200-179071000 | Strong transcription | NHEK | skin |
| 40 | chr1:179053200-179096000 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 41 | chr1:179053400-179056200 | Weak transcription | Primary T helper cells fromperipheralblood | blood |
| 42 | chr1:179053400-179058200 | Strong transcription | K562 | blood |
| 43 | chr1:179053400-179059000 | Strong transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 44 | chr1:179053400-179062000 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 45 | chr1:179053400-179062200 | Weak transcription | Stomach Mucosa | stomach |
| 46 | chr1:179053400-179067400 | Strong transcription | Fetal Intestine Small | intestine |
| 47 | chr1:179053600-179055600 | Strong transcription | Colon Smooth Muscle | Colon |
| 48 | chr1:179053600-179056600 | Strong transcription | Fetal Muscle Leg | muscle |
| 49 | chr1:179053600-179060000 | Strong transcription | A549 | lung |
| 50 | chr1:179053800-179055400 | Strong transcription | Colonic Mucosa | Colon |
