The 2.0 version of rSNPBase

Variant report

Variant rs72709441
Chromosome Location chr1:179042316-179042317
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:122 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:179008600-179049800 Weak transcription Primary T helper naive cells from peripheral blood blood
2 chr1:179008600-179049800 Weak transcription Primary T killer naive cells fromperipheralblood blood
3 chr1:179009600-179050400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr1:179025000-179050200 Weak transcription HUVEC blood vessel
5 chr1:179025400-179050600 Weak transcription Fetal Brain Male brain
6 chr1:179025600-179050000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
7 chr1:179025600-179050400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
8 chr1:179025800-179050200 Weak transcription Fetal Heart heart
9 chr1:179027800-179042600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
10 chr1:179027800-179050600 Weak transcription Placenta Amnion Placenta Amnion
11 chr1:179028600-179050000 Weak transcription iPS-15b Cell Line embryonic stem cell
12 chr1:179028600-179050600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
13 chr1:179029600-179043200 Strong transcription Fetal Adrenal Gland Adrenal Gland
14 chr1:179032600-179043200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
15 chr1:179032600-179043200 Strong transcription Fetal Muscle Trunk muscle
16 chr1:179032800-179043600 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
17 chr1:179033000-179043600 Strong transcription Fetal Muscle Leg muscle
18 chr1:179033800-179042800 Weak transcription HMEC breast
19 chr1:179033800-179050000 Weak transcription Esophagus oesophagus
20 chr1:179034000-179050000 Weak transcription H9 Cell Line embryonic stem cell
21 chr1:179034200-179050000 Weak transcription Colonic Mucosa Colon
22 chr1:179034200-179050000 Weak transcription Fetal Kidney kidney
23 chr1:179035400-179050000 Weak transcription Fetal Lung lung
24 chr1:179036000-179046800 Weak transcription NHLF lung
25 chr1:179036200-179046400 Weak transcription Muscle Satellite Cultured Cells --
26 chr1:179036200-179049200 Weak transcription Primary T killer memory cells from peripheral blood blood
27 chr1:179036200-179050200 Weak transcription H1 Cell Line embryonic stem cell
28 chr1:179036200-179050800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
29 chr1:179036400-179049200 Weak transcription Primary T helper cells PMA-I stimulated --
30 chr1:179036400-179050000 Weak transcription iPS-20b Cell Line embryonic stem cell
31 chr1:179036400-179050200 Weak transcription Stomach Mucosa stomach
32 chr1:179036400-179050400 Weak transcription Right Ventricle heart
33 chr1:179037000-179042400 Strong transcription Ovary ovary
34 chr1:179038400-179042800 Weak transcription HUES6 Cell Line embryonic stem cell
35 chr1:179038400-179049800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
36 chr1:179038400-179049800 Weak transcription HepG2 liver
37 chr1:179038600-179050000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
38 chr1:179039600-179045200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
39 chr1:179040000-179045000 Strong transcription Monocytes-CD14+_RO01746 blood
40 chr1:179040400-179043600 Strong transcription K562 blood
41 chr1:179040600-179042400 Strong transcription Cortex derived primary cultured neurospheres brain
42 chr1:179040600-179042400 Strong transcription Duodenum Mucosa Duodenum
43 chr1:179040600-179043200 Strong transcription Primary T regulatory cells fromperipheralblood blood
44 chr1:179040600-179043200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
45 chr1:179040600-179043400 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
46 chr1:179040600-179043400 Strong transcription HUES48 Cell Line embryonic stem cell
47 chr1:179040600-179043600 Strong transcription Primary B cells from peripheral blood blood
48 chr1:179040600-179043600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
49 chr1:179040600-179043600 Strong transcription Adipose Nuclei Adipose
50 chr1:179040600-179043600 Strong transcription Rectal Mucosa Donor 31 rectum

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Last update: Aug 31, 2015