The 2.0 version of rSNPBase

Variant report

Variant rs72707288
Chromosome Location chr1:179000725-179000726
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:114 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:178996200-179001200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
2 chr1:178996200-179003200 Weak transcription Gastric stomach
3 chr1:178996200-179009200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr1:178996400-179000800 Enhancers Primary T cells from cord blood blood
5 chr1:178996400-179001400 Weak transcription Aorta Aorta
6 chr1:178996400-179001800 Enhancers Primary T helper cells fromperipheralblood blood
7 chr1:178996400-179003200 Weak transcription Primary T cells fromperipheralblood blood
8 chr1:178996400-179003200 Weak transcription Esophagus oesophagus
9 chr1:178996400-179006200 Weak transcription Fetal Stomach stomach
10 chr1:178996400-179011200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
11 chr1:178996600-179001000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
12 chr1:178996600-179004000 Weak transcription Fetal Kidney kidney
13 chr1:178996800-179000800 Weak transcription Fetal Brain Female brain
14 chr1:178996800-179001000 Weak transcription NH-A brain
15 chr1:178996800-179001400 Enhancers Primary T helper naive cells fromperipheralblood blood
16 chr1:178996800-179001400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
17 chr1:178996800-179001800 Weak transcription Fetal Muscle Leg muscle
18 chr1:178996800-179002600 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
19 chr1:178996800-179003000 Weak transcription Right Ventricle heart
20 chr1:178996800-179003200 Weak transcription Thymus Thymus
21 chr1:178997000-179000800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
22 chr1:178997000-179000800 Weak transcription HSMM muscle
23 chr1:178997000-179000800 Weak transcription Osteobl bone
24 chr1:178997000-179001000 Weak transcription Muscle Satellite Cultured Cells --
25 chr1:178997000-179001000 Weak transcription HMEC breast
26 chr1:178997000-179001400 Weak transcription HUVEC blood vessel
27 chr1:178997000-179003200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
28 chr1:178997000-179003200 Weak transcription Brain Inferior Temporal Lobe brain
29 chr1:178997000-179005800 Weak transcription Brain Substantia Nigra brain
30 chr1:178997200-179003200 Weak transcription Primary T regulatory cells fromperipheralblood blood
31 chr1:178997600-179002200 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
32 chr1:178997600-179002200 Flanking Active TSS GM12878-XiMat blood
33 chr1:178997800-179001400 Enhancers Primary T helper cells PMA-I stimulated --
34 chr1:178997800-179001800 Enhancers Duodenum Mucosa Duodenum
35 chr1:178997800-179004800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
36 chr1:178998200-179000800 Enhancers Primary T killer naive cells fromperipheralblood blood
37 chr1:178998200-179001600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
38 chr1:178998200-179002000 Enhancers Adipose Nuclei Adipose
39 chr1:178998200-179002200 Enhancers NHEK skin
40 chr1:178998200-179002400 Enhancers Primary T helper memory cells from peripheral blood 2 blood
41 chr1:178998200-179002400 Enhancers Fetal Heart heart
42 chr1:178998200-179002600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
43 chr1:178998200-179004800 Enhancers Skeletal Muscle Male skeletal muscle
44 chr1:178998200-179004800 Enhancers Skeletal Muscle Female skeletal muscle
45 chr1:178998200-179008600 Enhancers Colon Smooth Muscle Colon
46 chr1:178998400-179001600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
47 chr1:178998400-179002200 Enhancers A549 lung
48 chr1:178998400-179003200 Weak transcription ES-WA7 Cell Line embryonic stem cell
49 chr1:178998400-179027400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
50 chr1:178998600-179000800 Enhancers Stomach Smooth Muscle stomach

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Last update: Aug 31, 2015