The 2.0 version of rSNPBase

Variant report

Variant rs9249
Chromosome Location chr1:179045473-179045474
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:121 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:179008600-179049800 Weak transcription Primary T helper naive cells from peripheral blood blood
2 chr1:179008600-179049800 Weak transcription Primary T killer naive cells fromperipheralblood blood
3 chr1:179009600-179050400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr1:179025000-179050200 Weak transcription HUVEC blood vessel
5 chr1:179025400-179050600 Weak transcription Fetal Brain Male brain
6 chr1:179025600-179050000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
7 chr1:179025600-179050400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
8 chr1:179025800-179050200 Weak transcription Fetal Heart heart
9 chr1:179027800-179050600 Weak transcription Placenta Amnion Placenta Amnion
10 chr1:179028600-179050000 Weak transcription iPS-15b Cell Line embryonic stem cell
11 chr1:179028600-179050600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
12 chr1:179033800-179050000 Weak transcription Esophagus oesophagus
13 chr1:179034000-179050000 Weak transcription H9 Cell Line embryonic stem cell
14 chr1:179034200-179050000 Weak transcription Colonic Mucosa Colon
15 chr1:179034200-179050000 Weak transcription Fetal Kidney kidney
16 chr1:179035400-179050000 Weak transcription Fetal Lung lung
17 chr1:179036000-179046800 Weak transcription NHLF lung
18 chr1:179036200-179046400 Weak transcription Muscle Satellite Cultured Cells --
19 chr1:179036200-179049200 Weak transcription Primary T killer memory cells from peripheral blood blood
20 chr1:179036200-179050200 Weak transcription H1 Cell Line embryonic stem cell
21 chr1:179036200-179050800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
22 chr1:179036400-179049200 Weak transcription Primary T helper cells PMA-I stimulated --
23 chr1:179036400-179050000 Weak transcription iPS-20b Cell Line embryonic stem cell
24 chr1:179036400-179050200 Weak transcription Stomach Mucosa stomach
25 chr1:179036400-179050400 Weak transcription Right Ventricle heart
26 chr1:179038400-179049800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
27 chr1:179038400-179049800 Weak transcription HepG2 liver
28 chr1:179038600-179050000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
29 chr1:179040600-179046200 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
30 chr1:179041000-179046400 Strong transcription Breast Myoepithelial Primary Cells Breast
31 chr1:179041600-179046200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
32 chr1:179041600-179050000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
33 chr1:179041600-179050000 Weak transcription Colon Smooth Muscle Colon
34 chr1:179041600-179050000 Weak transcription Sigmoid Colon Sigmoid Colon
35 chr1:179041600-179050000 Weak transcription NHEK skin
36 chr1:179041600-179050200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
37 chr1:179041600-179050200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
38 chr1:179041600-179050200 Weak transcription Brain Substantia Nigra brain
39 chr1:179041600-179050200 Weak transcription Fetal Stomach stomach
40 chr1:179041600-179050600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
41 chr1:179041600-179050600 Weak transcription Lung lung
42 chr1:179041800-179048200 Weak transcription Liver Liver
43 chr1:179041800-179049600 Weak transcription Primary T helper naive cells fromperipheralblood blood
44 chr1:179041800-179049800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
45 chr1:179041800-179049800 Weak transcription Pancreas Pancrea
46 chr1:179041800-179049800 Weak transcription Skeletal Muscle Male skeletal muscle
47 chr1:179041800-179050200 Weak transcription HUES64 Cell Line embryonic stem cell
48 chr1:179041800-179050200 Weak transcription Primary neutrophils fromperipheralblood blood
49 chr1:179041800-179050200 Weak transcription Spleen Spleen
50 chr1:179041800-179050400 Weak transcription Small Intestine intestine

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Last update: Aug 31, 2015