The 2.0 version of rSNPBase

Variant report

Variant rs2147769
Chromosome Location chr1:179023601-179023602
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:119 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:178998400-179027400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr1:179003800-179025800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
3 chr1:179004200-179024200 Weak transcription Liver Liver
4 chr1:179004400-179024200 Weak transcription Fetal Kidney kidney
5 chr1:179004800-179024600 Weak transcription Primary B cells from cord blood blood
6 chr1:179006000-179024200 Weak transcription Sigmoid Colon Sigmoid Colon
7 chr1:179006400-179024800 Weak transcription Rectal Mucosa Donor 31 rectum
8 chr1:179006400-179032400 Weak transcription Esophagus oesophagus
9 chr1:179006800-179024200 Weak transcription Primary T regulatory cells fromperipheralblood blood
10 chr1:179007000-179024200 Weak transcription HUVEC blood vessel
11 chr1:179007600-179024200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
12 chr1:179008000-179033000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
13 chr1:179008400-179033000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
14 chr1:179008400-179041000 Weak transcription Small Intestine intestine
15 chr1:179008600-179024200 Weak transcription Primary B cells from peripheral blood blood
16 chr1:179008600-179024400 Weak transcription Hela-S3 cervix
17 chr1:179008600-179033000 Weak transcription Brain Angular Gyrus brain
18 chr1:179008600-179035000 Weak transcription Primary T killer memory cells from peripheral blood blood
19 chr1:179008600-179049800 Weak transcription Primary T helper naive cells from peripheral blood blood
20 chr1:179008600-179049800 Weak transcription Primary T killer naive cells fromperipheralblood blood
21 chr1:179008800-179024400 Weak transcription NHDF-Ad bronchial
22 chr1:179008800-179024800 Weak transcription HMEC breast
23 chr1:179009400-179033000 Weak transcription Gastric stomach
24 chr1:179009600-179050400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
25 chr1:179011600-179025400 Weak transcription iPS-18 Cell Line embryonic stem cell
26 chr1:179011800-179024800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
27 chr1:179011800-179025200 Weak transcription HUES6 Cell Line embryonic stem cell
28 chr1:179012000-179025200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
29 chr1:179012200-179024000 Weak transcription Cortex derived primary cultured neurospheres brain
30 chr1:179012200-179033000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
31 chr1:179012400-179025800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
32 chr1:179012600-179024200 Weak transcription Fetal Thymus thymus
33 chr1:179012600-179027600 Weak transcription Lung lung
34 chr1:179013000-179023800 Weak transcription Fetal Muscle Leg muscle
35 chr1:179013200-179027400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
36 chr1:179013200-179027400 Weak transcription H9 Cell Line embryonic stem cell
37 chr1:179013200-179032600 Weak transcription GM12878-XiMat blood
38 chr1:179013400-179025000 Weak transcription Fetal Lung lung
39 chr1:179013400-179030200 Weak transcription Fetal Intestine Small intestine
40 chr1:179013400-179030400 Weak transcription Fetal Stomach stomach
41 chr1:179013400-179033200 Weak transcription Thymus Thymus
42 chr1:179013800-179023800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
43 chr1:179013800-179024800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
44 chr1:179014200-179024000 Weak transcription Primary T cells fromperipheralblood blood
45 chr1:179014200-179024200 Weak transcription Rectal Mucosa Donor 29 rectum
46 chr1:179015400-179025000 Weak transcription Fetal Brain Male brain
47 chr1:179016600-179032600 Weak transcription Aorta Aorta
48 chr1:179016800-179023800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
49 chr1:179016800-179023800 Weak transcription Primary T helper cells PMA-I stimulated --
50 chr1:179016800-179024000 Weak transcription Ovary ovary

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Last update: Aug 31, 2015