The 2.0 version of rSNPBase

Variant report

Variant rs2297150
Chromosome Location chr10:27382586-27382587
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:117 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:27283200-27388400 Weak transcription Psoas Muscle Psoas
2 chr10:27291600-27388000 Weak transcription Small Intestine intestine
3 chr10:27313200-27388200 Weak transcription Primary T helper naive cells from peripheral blood blood
4 chr10:27313200-27388600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
5 chr10:27313400-27388400 Weak transcription Placenta Amnion Placenta Amnion
6 chr10:27314600-27388800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
7 chr10:27323400-27388600 Weak transcription H9 Cell Line embryonic stem cell
8 chr10:27326800-27388200 Weak transcription Brain Substantia Nigra brain
9 chr10:27328000-27388200 Weak transcription K562 blood
10 chr10:27333000-27384600 Weak transcription Fetal Heart heart
11 chr10:27350200-27387800 Weak transcription HMEC breast
12 chr10:27358600-27388400 Weak transcription ES-I3 Cell Line embryonic stem cell
13 chr10:27360400-27383800 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
14 chr10:27360400-27384800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
15 chr10:27360600-27384600 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
16 chr10:27361600-27388200 Weak transcription Primary T killer memory cells from peripheral blood blood
17 chr10:27362200-27388400 Weak transcription Colonic Mucosa Colon
18 chr10:27362400-27388000 Weak transcription Right Ventricle heart
19 chr10:27362400-27388200 Weak transcription Pancreatic Islets Pancreatic Islet
20 chr10:27362400-27388400 Weak transcription Pancreas Pancrea
21 chr10:27362600-27388400 Weak transcription Esophagus oesophagus
22 chr10:27362600-27388400 Weak transcription Spleen Spleen
23 chr10:27362600-27388800 Weak transcription Gastric stomach
24 chr10:27362800-27388600 Weak transcription ES-WA7 Cell Line embryonic stem cell
25 chr10:27365000-27388000 Weak transcription Primary T helper naive cells fromperipheralblood blood
26 chr10:27366600-27388000 Weak transcription Primary T regulatory cells fromperipheralblood blood
27 chr10:27366600-27388600 Weak transcription Fetal Kidney kidney
28 chr10:27367200-27382600 Weak transcription Primary monocytes fromperipheralblood blood
29 chr10:27367400-27388200 Weak transcription Primary B cells from peripheral blood blood
30 chr10:27367600-27388400 Weak transcription Brain Inferior Temporal Lobe brain
31 chr10:27367800-27387800 Weak transcription Primary T killer naive cells fromperipheralblood blood
32 chr10:27369800-27388200 Weak transcription NHDF-Ad bronchial
33 chr10:27370000-27388600 Weak transcription Aorta Aorta
34 chr10:27371000-27383600 Strong transcription HUES6 Cell Line embryonic stem cell
35 chr10:27375000-27382800 Weak transcription GM12878-XiMat blood
36 chr10:27375800-27382800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
37 chr10:27375800-27383400 Strong transcription Primary T cells from cord blood blood
38 chr10:27376000-27383800 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
39 chr10:27376400-27384000 Strong transcription Fetal Stomach stomach
40 chr10:27376600-27383200 Strong transcription Breast Myoepithelial Primary Cells Breast
41 chr10:27376600-27383400 Strong transcription Liver Liver
42 chr10:27376600-27383600 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
43 chr10:27376600-27383800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
44 chr10:27376600-27383800 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
45 chr10:27376600-27384000 Strong transcription Fetal Intestine Small intestine
46 chr10:27376800-27383400 Strong transcription Adipose Nuclei Adipose
47 chr10:27376800-27384600 Strong transcription Fetal Intestine Large intestine
48 chr10:27377200-27388200 Weak transcription NHLF lung
49 chr10:27377800-27383000 Strong transcription Muscle Satellite Cultured Cells --
50 chr10:27377800-27383400 Strong transcription NH-A brain

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Last update: Aug 31, 2015