The 2.0 version of rSNPBase

Variant report

Variant rs2299307
Chromosome Location chr7:104825555-104825556
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:42 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:104754400-104850400 Weak transcription Fetal Kidney kidney
2 chr7:104782800-104845600 Weak transcription Spleen Spleen
3 chr7:104806400-104838200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
4 chr7:104806600-104836800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
5 chr7:104806600-104842000 Weak transcription Sigmoid Colon Sigmoid Colon
6 chr7:104807600-104829800 Weak transcription Thymus Thymus
7 chr7:104809000-104836600 Weak transcription HSMM muscle
8 chr7:104809000-104838800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
9 chr7:104809200-104825600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
10 chr7:104809200-104825800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
11 chr7:104809600-104825800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
12 chr7:104809600-104838000 Weak transcription Duodenum Smooth Muscle Duodenum
13 chr7:104809800-104826600 Weak transcription Primary B cells from cord blood blood
14 chr7:104809800-104838000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
15 chr7:104810200-104840600 Weak transcription Primary T helper cells fromperipheralblood blood
16 chr7:104814000-104839800 Weak transcription Primary T helper naive cells fromperipheralblood blood
17 chr7:104814200-104827000 Weak transcription Pancreas Pancrea
18 chr7:104815600-104836600 Weak transcription Primary T helper cells PMA-I stimulated --
19 chr7:104819800-104829400 Weak transcription Brain Angular Gyrus brain
20 chr7:104820000-104827800 Weak transcription Stomach Mucosa stomach
21 chr7:104820800-104833800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
22 chr7:104821000-104828400 Weak transcription Brain Substantia Nigra brain
23 chr7:104821000-104829200 Weak transcription Brain Hippocampus Middle brain
24 chr7:104821000-104829800 Weak transcription Primary hematopoietic stem cells blood
25 chr7:104821000-104838400 Weak transcription Fetal Lung lung
26 chr7:104821200-104830000 Weak transcription Fetal Thymus thymus
27 chr7:104821200-104830400 Weak transcription Fetal Muscle Trunk muscle
28 chr7:104821600-104838400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
29 chr7:104822000-104836400 Weak transcription A549 lung
30 chr7:104822000-104858800 Weak transcription Gastric stomach
31 chr7:104822200-104826200 Weak transcription Brain Inferior Temporal Lobe brain
32 chr7:104822800-104838200 Weak transcription Primary T cells from cord blood blood
33 chr7:104823600-104829400 Weak transcription Primary T cells fromperipheralblood blood
34 chr7:104823600-104848600 Strong transcription Dnd41 blood
35 chr7:104824800-104828800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
36 chr7:104825000-104825800 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
37 chr7:104825000-104826000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
38 chr7:104825000-104826000 Enhancers NHEK skin
39 chr7:104825000-104837800 Weak transcription NH-A brain
40 chr7:104825200-104825800 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
41 chr7:104825200-104826400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
42 chr7:104825200-104829800 Enhancers HMEC breast

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Last update: Aug 31, 2015