The 2.0 version of rSNPBase

Variant report

Variant rs58319797
Chromosome Location chr7:104953159-104953160
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:43 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:104920600-104959600 Weak transcription Primary hematopoietic stem cells blood
2 chr7:104939200-104954400 Weak transcription Stomach Mucosa stomach
3 chr7:104939600-104966200 Weak transcription H9 Cell Line embryonic stem cell
4 chr7:104942000-104953200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
5 chr7:104945400-104954400 Weak transcription NHEK skin
6 chr7:104945400-104972600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
7 chr7:104945800-104955400 Weak transcription Liver Liver
8 chr7:104945800-104961200 Weak transcription Ovary ovary
9 chr7:104946200-104957000 Weak transcription iPS-15b Cell Line embryonic stem cell
10 chr7:104947000-104954000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
11 chr7:104948600-104988000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
12 chr7:104950600-104954000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
13 chr7:104950600-104954000 Weak transcription Esophagus oesophagus
14 chr7:104950600-104954200 Weak transcription Fetal Lung lung
15 chr7:104950600-104954800 Weak transcription Right Atrium heart
16 chr7:104950600-104955200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
17 chr7:104950600-104955600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
18 chr7:104950600-104955800 Weak transcription Adipose Nuclei Adipose
19 chr7:104950600-104956600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
20 chr7:104950600-104957200 Weak transcription Skeletal Muscle Female skeletal muscle
21 chr7:104950600-104959200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
22 chr7:104950600-104962800 Weak transcription Pancreas Pancrea
23 chr7:104950600-104965600 Weak transcription Primary B cells from cord blood blood
24 chr7:104950600-104972200 Weak transcription Sigmoid Colon Sigmoid Colon
25 chr7:104950800-104955400 Weak transcription Primary T helper cells PMA-I stimulated --
26 chr7:104950800-104955600 Weak transcription Pancreatic Islets Pancreatic Islet
27 chr7:104950800-104955600 Weak transcription Osteobl bone
28 chr7:104950800-104957200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
29 chr7:104950800-104957200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
30 chr7:104950800-104957200 Weak transcription Primary T helper naive cells from peripheral blood blood
31 chr7:104950800-104962400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
32 chr7:104950800-104963600 Weak transcription Primary T cells from cord blood blood
33 chr7:104950800-104965400 Weak transcription Primary B cells from peripheral blood blood
34 chr7:104950800-104967800 Weak transcription Gastric stomach
35 chr7:104951000-104962600 Weak transcription Left Ventricle heart
36 chr7:104951200-104958200 Weak transcription Primary T cells fromperipheralblood blood
37 chr7:104951600-104961000 Weak transcription Primary T killer naive cells fromperipheralblood blood
38 chr7:104952000-104958600 Weak transcription Lung lung
39 chr7:104952200-104959400 Weak transcription GM12878-XiMat blood
40 chr7:104952200-104966200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
41 chr7:104952800-104954600 Weak transcription Dnd41 blood
42 chr7:104953000-104953400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
43 chr7:104953000-104953400 Enhancers NH-A brain

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Last update: Aug 31, 2015