The 2.0 version of rSNPBase

Variant report

Variant rs2301669
Chromosome Location chr19:19453560-19453561
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:19433400-19469800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr19:19433400-19470600 Strong transcription Fetal Stomach stomach
3 chr19:19433800-19468400 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
4 chr19:19433800-19469800 Strong transcription Fetal Intestine Large intestine
5 chr19:19433800-19470400 Strong transcription Placenta Placenta
6 chr19:19434200-19469000 Strong transcription Fetal Thymus thymus
7 chr19:19434200-19469800 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
8 chr19:19434200-19469800 Strong transcription Cortex derived primary cultured neurospheres brain
9 chr19:19434600-19466000 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
10 chr19:19434800-19470600 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
11 chr19:19435000-19471000 Strong transcription Fetal Brain Female brain
12 chr19:19435600-19455400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
13 chr19:19435600-19468600 Strong transcription Dnd41 blood
14 chr19:19435600-19470400 Strong transcription Brain Germinal Matrix brain
15 chr19:19435600-19477600 Weak transcription Fetal Heart heart
16 chr19:19436000-19460600 Strong transcription Brain Cingulate Gyrus brain
17 chr19:19436800-19455600 Weak transcription Pancreatic Islets Pancreatic Islet
18 chr19:19438200-19469600 Strong transcription Thymus Thymus
19 chr19:19438600-19460800 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
20 chr19:19438800-19468800 Strong transcription Primary mononuclear cells fromperipheralblood Blood
21 chr19:19439600-19461000 Strong transcription Duodenum Smooth Muscle Duodenum
22 chr19:19439600-19469800 Strong transcription Rectal Mucosa Donor 29 rectum
23 chr19:19440000-19470400 Strong transcription Primary hematopoietic stem cells short term culture blood
24 chr19:19440400-19468400 Strong transcription Primary T helper cells fromperipheralblood blood
25 chr19:19440400-19468600 Strong transcription Primary T regulatory cells fromperipheralblood blood
26 chr19:19440400-19469000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
27 chr19:19440400-19469000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
28 chr19:19440400-19469200 Strong transcription Lung lung
29 chr19:19440400-19469400 Strong transcription Liver Liver
30 chr19:19440400-19475400 Weak transcription Right Atrium heart
31 chr19:19440600-19468400 Strong transcription Primary T helper naive cells fromperipheralblood blood
32 chr19:19440600-19468800 Strong transcription Primary T cells fromperipheralblood blood
33 chr19:19440800-19468600 Strong transcription Primary monocytes fromperipheralblood blood
34 chr19:19440800-19470400 Strong transcription Monocytes-CD14+_RO01746 blood
35 chr19:19440800-19470600 Strong transcription Fetal Adrenal Gland Adrenal Gland
36 chr19:19441200-19468600 Strong transcription Primary T helper cells PMA-I stimulated --
37 chr19:19441600-19470400 Strong transcription Primary neutrophils fromperipheralblood blood
38 chr19:19441800-19460800 Strong transcription Rectal Mucosa Donor 31 rectum
39 chr19:19444600-19460800 Strong transcription Primary T helper 17 cells PMA-I stimulated --
40 chr19:19445200-19468000 Strong transcription Primary Natural Killer cells fromperipheralblood blood
41 chr19:19446000-19468000 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
42 chr19:19446600-19470800 Strong transcription Fetal Intestine Small intestine
43 chr19:19446800-19467400 Strong transcription Fetal Muscle Trunk muscle
44 chr19:19447200-19467400 Strong transcription Fetal Muscle Leg muscle
45 chr19:19448000-19468600 Strong transcription Brain Dorsolateral Prefrontal Cortex brain
46 chr19:19449000-19469800 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
47 chr19:19449200-19455200 Weak transcription HUVEC blood vessel
48 chr19:19449200-19458600 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
49 chr19:19449200-19470000 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
50 chr19:19449400-19458800 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived

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Last update: Aug 31, 2015