The 2.0 version of rSNPBase

Variant report

Variant rs7254927
Chromosome Location chr19:19404786-19404787
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:19384400-19430600 Weak transcription Right Atrium heart
2 chr19:19385400-19409800 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
3 chr19:19385400-19428400 Strong transcription Primary mononuclear cells fromperipheralblood Blood
4 chr19:19385600-19410000 Strong transcription Stomach Smooth Muscle stomach
5 chr19:19385800-19409600 Strong transcription Primary neutrophils fromperipheralblood blood
6 chr19:19385800-19410000 Strong transcription Monocytes-CD14+_RO01746 blood
7 chr19:19386000-19415200 Strong transcription Cortex derived primary cultured neurospheres brain
8 chr19:19386200-19408200 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
9 chr19:19386200-19421000 Weak transcription Stomach Mucosa stomach
10 chr19:19386400-19405400 Strong transcription HUES48 Cell Line embryonic stem cell
11 chr19:19386800-19405200 Strong transcription Liver Liver
12 chr19:19386800-19428400 Strong transcription Fetal Intestine Small intestine
13 chr19:19387000-19408600 Strong transcription Primary T helper 17 cells PMA-I stimulated --
14 chr19:19387200-19408400 Strong transcription HUES64 Cell Line embryonic stem cell
15 chr19:19388000-19429000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
16 chr19:19389200-19412800 Weak transcription HMEC breast
17 chr19:19389600-19419000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
18 chr19:19390400-19411800 Weak transcription Primary T killer naive cells fromperipheralblood blood
19 chr19:19390400-19412200 Weak transcription Pancreatic Islets Pancreatic Islet
20 chr19:19390800-19430000 Weak transcription Psoas Muscle Psoas
21 chr19:19392200-19407000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
22 chr19:19392400-19415000 Weak transcription Fetal Heart heart
23 chr19:19392600-19412600 Weak transcription Fetal Brain Male brain
24 chr19:19393800-19418600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
25 chr19:19394400-19408600 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
26 chr19:19394600-19409800 Strong transcription Primary T helper cells fromperipheralblood blood
27 chr19:19394800-19406800 Strong transcription Primary T helper cells PMA-I stimulated --
28 chr19:19395600-19412800 Weak transcription NHEK skin
29 chr19:19396800-19406400 Weak transcription Esophagus oesophagus
30 chr19:19397200-19405000 Weak transcription Primary T helper naive cells from peripheral blood blood
31 chr19:19397200-19420800 Weak transcription NHDF-Ad bronchial
32 chr19:19397400-19407600 Weak transcription NHLF lung
33 chr19:19397400-19418600 Weak transcription Primary T killer memory cells from peripheral blood blood
34 chr19:19397600-19416400 Weak transcription Small Intestine intestine
35 chr19:19398000-19426800 Weak transcription K562 blood
36 chr19:19398200-19405000 Weak transcription Pancreas Pancrea
37 chr19:19398200-19411200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
38 chr19:19398400-19412000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
39 chr19:19399000-19407600 Weak transcription Brain Substantia Nigra brain
40 chr19:19399200-19406400 Weak transcription Rectal Smooth Muscle rectum
41 chr19:19400400-19408600 Strong transcription Primary T helper naive cells fromperipheralblood blood
42 chr19:19401200-19405200 Weak transcription Osteobl bone
43 chr19:19401200-19406800 Weak transcription Primary B cells from cord blood blood
44 chr19:19401200-19411200 Weak transcription Colonic Mucosa Colon
45 chr19:19401200-19412200 Weak transcription iPS-15b Cell Line embryonic stem cell
46 chr19:19401200-19412200 Weak transcription Brain Angular Gyrus brain
47 chr19:19401400-19413400 Weak transcription HepG2 liver
48 chr19:19402400-19427600 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
49 chr19:19402400-19427800 Strong transcription Primary hematopoietic stem cells short term culture blood
50 chr19:19402600-19427400 Strong transcription Lung lung

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Last update: Aug 31, 2015