Variant report

Variant rs7254230
Chromosome Location chr19:19434350-19434351
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:19432600-19445400 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr19:19432800-19434400 Weak transcription H1 Cell Line embryonic stem cell
3 chr19:19432800-19434400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr19:19432800-19434400 Weak transcription HUES48 Cell Line embryonic stem cell
5 chr19:19432800-19434400 Weak transcription iPS-15b Cell Line embryonic stem cell
6 chr19:19432800-19434400 Weak transcription Brain Anterior Caudate brain
7 chr19:19432800-19434400 Weak transcription Gastric stomach
8 chr19:19432800-19434400 Weak transcription Psoas Muscle Psoas
9 chr19:19432800-19434400 Enhancers Skeletal Muscle Female skeletal muscle
10 chr19:19432800-19434400 Weak transcription HMEC breast
11 chr19:19432800-19434400 Weak transcription HSMM muscle
12 chr19:19432800-19434400 Weak transcription NHEK skin
13 chr19:19432800-19434400 Weak transcription Osteobl bone
14 chr19:19432800-19434600 Weak transcription H9 Cell Line embryonic stem cell
15 chr19:19432800-19434600 Weak transcription HUES64 Cell Line embryonic stem cell
16 chr19:19432800-19434600 Weak transcription iPS-18 Cell Line embryonic stem cell
17 chr19:19432800-19434600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
18 chr19:19432800-19434600 Enhancers Primary T helper memory cells from peripheral blood 2 blood
19 chr19:19432800-19434600 Enhancers Primary Natural Killer cells fromperipheralblood blood
20 chr19:19432800-19434600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
21 chr19:19432800-19434600 Enhancers Fetal Brain Male brain
22 chr19:19432800-19434600 Weak transcription Ovary ovary
23 chr19:19432800-19434800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
24 chr19:19432800-19434800 Weak transcription Aorta Aorta
25 chr19:19432800-19434800 Weak transcription HSMMtube muscle
26 chr19:19432800-19435000 Weak transcription Pancreatic Islets Pancreatic Islet
27 chr19:19432800-19435000 Weak transcription NHDF-Ad bronchial
28 chr19:19432800-19435400 Enhancers Primary T killer naive cells fromperipheralblood blood
29 chr19:19432800-19436800 Weak transcription Small Intestine intestine
30 chr19:19432800-19438400 Weak transcription A549 lung
31 chr19:19432800-19445400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
32 chr19:19432800-19447400 Weak transcription ES-I3 Cell Line embryonic stem cell
33 chr19:19433000-19434400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
34 chr19:19433200-19434400 Weak transcription Muscle Satellite Cultured Cells --
35 chr19:19433200-19434400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
36 chr19:19433200-19434400 Enhancers Pancreas Pancrea
37 chr19:19433200-19434800 Strong transcription Primary mononuclear cells fromperipheralblood Blood
38 chr19:19433200-19435400 Genic enhancers Fetal Muscle Trunk muscle
39 chr19:19433200-19435600 Genic enhancers Thymus Thymus
40 chr19:19433200-19439000 Genic enhancers Primary neutrophils fromperipheralblood blood
41 chr19:19433200-19452800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
42 chr19:19433400-19434400 Weak transcription iPS-20b Cell Line embryonic stem cell
43 chr19:19433400-19434400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
44 chr19:19433400-19434400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
45 chr19:19433400-19434400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
46 chr19:19433400-19434400 Weak transcription Primary monocytes fromperipheralblood blood
47 chr19:19433400-19434400 Enhancers Primary T helper naive cells fromperipheralblood blood
48 chr19:19433400-19434400 Weak transcription Liver Liver
49 chr19:19433400-19434400 Weak transcription Brain Cingulate Gyrus brain
50 chr19:19433400-19434400 Weak transcription Brain Inferior Temporal Lobe brain

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